Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G036000.1 | Wheat | endoplasmic reticulum, golgi, plasma membrane | 87.5 | 88.93 |
| TraesCS6A01G025200.1 | Wheat | plasma membrane | 86.29 | 87.89 |
| HORVU7Hr1G042050.1 | Barley | golgi | 75.6 | 77.0 |
| HORVU7Hr1G042040.1 | Barley | golgi | 75.0 | 75.0 |
| HORVU6Hr1G094160.2 | Barley | endoplasmic reticulum, golgi, plasma membrane | 73.39 | 74.29 |
| OQU76197 | Sorghum | golgi | 61.69 | 63.88 |
| HORVU6Hr1G073300.1 | Barley | golgi, plasma membrane | 58.67 | 60.12 |
| HORVU0Hr1G038430.1 | Barley | endoplasmic reticulum, plasma membrane | 54.44 | 58.7 |
| HORVU3Hr1G097570.1 | Barley | golgi | 56.45 | 57.26 |
| HORVU7Hr1G006910.1 | Barley | plasma membrane | 54.84 | 55.85 |
| HORVU1Hr1G086760.1 | Barley | cytosol | 56.85 | 55.84 |
| HORVU6Hr1G082270.1 | Barley | golgi | 55.65 | 53.91 |
| HORVU7Hr1G023540.1 | Barley | mitochondrion | 30.85 | 53.68 |
| HORVU7Hr1G022720.1 | Barley | plasma membrane | 37.5 | 51.81 |
| HORVU7Hr1G023280.1 | Barley | plasma membrane | 47.18 | 51.77 |
| GSMUA_Achr3P07400_001 | Banana | plasma membrane | 40.52 | 51.67 |
| PGSC0003DMT400037757 | Potato | plastid | 47.98 | 51.63 |
| HORVU4Hr1G067340.2 | Barley | golgi | 51.41 | 50.9 |
| Bra004034.1-P | Field mustard | plasma membrane | 50.2 | 50.61 |
| CDY04232 | Canola | plasma membrane | 50.4 | 50.3 |
| HORVU2Hr1G112840.1 | Barley | endoplasmic reticulum, golgi | 47.38 | 50.21 |
| KRG90814 | Soybean | cytosol, golgi, plasma membrane | 50.2 | 50.2 |
| CDY07381 | Canola | plasma membrane | 50.2 | 50.1 |
| GSMUA_Achr5P05870_001 | Banana | plasma membrane | 42.34 | 50.0 |
| KRH35956 | Soybean | plasma membrane | 50.0 | 50.0 |
| VIT_14s0006g02990.t01 | Wine grape | plasma membrane | 49.6 | 50.0 |
| CDY42109 | Canola | plasma membrane | 49.8 | 49.7 |
| Bra024749.1-P | Field mustard | plasma membrane | 49.8 | 49.7 |
| Solyc02g085870.2.1 | Tomato | plasma membrane | 49.6 | 49.6 |
| PGSC0003DMT400032993 | Potato | plasma membrane | 49.4 | 49.4 |
| KRH45255 | Soybean | endoplasmic reticulum, peroxisome, plasma membrane | 49.19 | 49.19 |
| PGSC0003DMT400037714 | Potato | plasma membrane | 48.99 | 49.19 |
| AT1G68530.1 | Thale cress | plasma membrane | 49.19 | 49.09 |
| PGSC0003DMT400062136 | Potato | cytosol, golgi, plasma membrane | 48.99 | 48.99 |
| Solyc02g063140.2.1 | Tomato | golgi | 48.99 | 48.99 |
| VIT_01s0011g03490.t01 | Wine grape | cytosol, golgi, plasma membrane | 48.99 | 48.99 |
| Solyc05g009270.2.1 | Tomato | endoplasmic reticulum, golgi, plasma membrane | 48.79 | 48.99 |
| AT1G25450.1 | Thale cress | plasma membrane | 48.39 | 48.78 |
| VIT_19s0093g00440.t01 | Wine grape | endoplasmic reticulum, golgi, plasma membrane | 47.98 | 48.37 |
| HORVU7Hr1G022780.1 | Barley | golgi, mitochondrion | 45.97 | 48.1 |
| HORVU7Hr1G022580.1 | Barley | golgi, mitochondrion | 34.88 | 47.4 |
| HORVU5Hr1G122360.1 | Barley | endoplasmic reticulum, mitochondrion, plasma membrane, plastid | 47.18 | 47.37 |
| HORVU7Hr1G030880.1 | Barley | plasma membrane | 47.58 | 47.29 |
| HORVU5Hr1G087530.1 | Barley | plasma membrane | 45.77 | 46.71 |
| Solyc05g009280.2.1 | Tomato | golgi, plasma membrane, plastid | 48.79 | 46.63 |
| HORVU3Hr1G069880.2 | Barley | mitochondrion, plastid | 50.0 | 46.27 |
| HORVU1Hr1G090730.1 | Barley | peroxisome, plasma membrane, plastid | 44.56 | 42.66 |
| HORVU4Hr1G073840.2 | Barley | golgi | 42.54 | 41.45 |
| HORVU6Hr1G036950.5 | Barley | cytosol, peroxisome | 45.36 | 38.99 |
| HORVU7Hr1G023530.2 | Barley | endoplasmic reticulum, extracellular | 37.5 | 38.35 |
| HORVU4Hr1G063420.1 | Barley | peroxisome | 41.73 | 37.98 |
| HORVU1Hr1G089710.3 | Barley | plastid | 44.35 | 37.35 |
| HORVU7Hr1G084610.6 | Barley | cytosol, mitochondrion, plastid | 44.35 | 36.67 |
| HORVU4Hr1G076940.1 | Barley | mitochondrion, peroxisome, plastid | 28.83 | 32.65 |
Protein Annotations
| KEGG:00061+2.3.1.180 | KEGG:00062+2.3.1.199 | InterPro:3-ktacl-CoA_syn | Gene3D:3.40.47.10 | MapMan:5.1.6.1.1 | UniProt:A0A287T724 |
| InterPro:ACP_syn_III_C | InterPro:FAE1_typ3_polyketide_synth | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006629 |
| GO:GO:0006633 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016740 | GO:GO:0016746 | GO:GO:0016747 | EnsemblPlantsGene:HORVU6Hr1G004830 | EnsemblPlants:HORVU6Hr1G004830.1 |
| InterPro:IPR016039 | PFAM:PF08392 | PFAM:PF08541 | PIRSF:PIRSF036417 | PANTHER:PTHR31561 | PANTHER:PTHR31561:SF64 |
| SUPFAM:SSF53901 | TMHMM:TMhelix | InterPro:Thiolase-like | UniParc:UPI000B488B7F | SEG:seg | : |
Description
3-ketoacyl-CoA synthase [Source:UniProtKB/TrEMBL;Acc:A0A287T724]
Coordinates
chrchr6H:-:10420372..10422222
Molecular Weight (calculated)
54701.4 Da
IEP (calculated)
8.689
GRAVY (calculated)
0.051
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: QQRSLTMGVR LSDMLISPSH LKHSFEIIVN NFLLLLATPT MALILLRKAA QLGPDEILSH LHGLRQVHAF LAVFLPFAFA TLYLMSRPRS VYLVDYSCCR
101: PESSCRVSMA SCTENARFSL DDGGHRFMAR MLKRSGLGDQ TYAHPSLHYI PPHCYLGECR DEAEQVIFAV VDDLFAKTGV SPEAIDILVT NCTAFNPTPS
201: LADMVVNKYK LRADIRSVHI SGMGCSAGVI SLEVARNLLQ AAPRGAHALM VSTENTSLIN YTGKNRAMLL PAALFRMGAA AVLLSTSRSE SRFRLTHIVR
301: TTTAAQDRAY RCAYQEEDDM GKMGVNLSKE LVAVAGDTLQ ANIVGIGSLV LPPSEKLLFA LSFVARKVLG KKIKLYVPDF RTAFQHFCIH CGGRAVIDAV
401: QNSLRLSDEN VEPSRVTLHR FGNTSSSSLW YELAYIEAKG RMRRGDQVWM IGFGSGFKCN SAVWQCIRSP GNGDTDIGTP WADSIHMYPL KISEVS
101: PESSCRVSMA SCTENARFSL DDGGHRFMAR MLKRSGLGDQ TYAHPSLHYI PPHCYLGECR DEAEQVIFAV VDDLFAKTGV SPEAIDILVT NCTAFNPTPS
201: LADMVVNKYK LRADIRSVHI SGMGCSAGVI SLEVARNLLQ AAPRGAHALM VSTENTSLIN YTGKNRAMLL PAALFRMGAA AVLLSTSRSE SRFRLTHIVR
301: TTTAAQDRAY RCAYQEEDDM GKMGVNLSKE LVAVAGDTLQ ANIVGIGSLV LPPSEKLLFA LSFVARKVLG KKIKLYVPDF RTAFQHFCIH CGGRAVIDAV
401: QNSLRLSDEN VEPSRVTLHR FGNTSSSSLW YELAYIEAKG RMRRGDQVWM IGFGSGFKCN SAVWQCIRSP GNGDTDIGTP WADSIHMYPL KISEVS
001: MDGAGESRLG GDGGGDGSVG VQIRQTRMLP DFLQSVNLKY VKLGYHYLIS NLLTLCLFPL AVVISVEASQ MNPDDLKQLW IHLQYNLVSI IICSAILVFG
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
101: LTVYVMTRPR PVYLVDFSCY LPPDHLKAPY ARFMEHSRLT GDFDDSALEF QRKILERSGL GEDTYVPEAM HYVPPRISMA AAREEAEQVM FGALDNLFAN
201: TNVKPKDIGI LVVNCSLFNP TPSLSAMIVN KYKLRGNIRS YNLGGMGCSA GVIAVDLAKD MLLVHRNTYA VVVSTENITQ NWYFGNKKSM LIPNCLFRVG
301: GSAVLLSNKS RDKRRSKYRL VHVVRTHRGA DDKAFRCVYQ EQDDTGRTGV SLSKDLMAIA GETLKTNITT LGPLVLPISE QILFFMTLVV KKLFNGKVKP
401: YIPDFKLAFE HFCIHAGGRA VIDELEKNLQ LSPVHVEASR MTLHRFGNTS SSSIWYELAY IEAKGRMRRG NRVWQIAFGS GFKCNSAIWE ALRHVKPSNN
501: SPWEDCIDKY PVTLSY
Arabidopsis Description
KCS43-ketoacyl-CoA synthase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LN49]
SUBAcon: [peroxisome,golgi,plasma membrane]
SUBAcon: [peroxisome,golgi,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.