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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS4A01G206200.2
TraesCS4B01G109800.2
TraesCS4D01G107200.1
TraesCS5A01G107900.1
TraesCS5B01G115400.1
TraesCS5D01G122800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT2G26640.1 TraesCS4A01G206200.2 AT4G09570.1 19130088
AT2G26640.1 TraesCS4B01G109800.2 AT4G09570.1 19130088
AT2G26640.1 TraesCS4D01G107200.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5A01G107900.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5B01G115400.1 AT4G09570.1 19130088
AT2G26640.1 TraesCS5D01G122800.1 AT4G09570.1 19130088
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G350500.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 97.31 97.31
TraesCS7A01G372300.1 Wheat cytosol, endoplasmic reticulum, plasma membrane 93.86 92.97
HORVU7Hr1G084610.6 Barley cytosol, mitochondrion, plastid 97.12 84.33
TraesCS6B01G207000.1 Wheat endoplasmic reticulum, plasma membrane, plastid 81.77 81.3
GSMUA_AchrUn_... Banana peroxisome 60.84 79.85
KRH56654 Soybean endoplasmic reticulum 77.74 79.41
KRH03757 Soybean cytosol, peroxisome, plasma membrane 77.16 78.82
PGSC0003DMT400067205 Potato peroxisome 77.54 78.75
Solyc06g065560.1.1 Tomato nucleus 77.54 78.75
AT2G26640.1 Thale cress plasma membrane 76.78 78.59
VIT_04s0008g04710.t01 Wine grape endoplasmic reticulum, peroxisome, plasma membrane 76.78 78.28
GSMUA_Achr10P... Banana plasma membrane 64.88 78.24
Solyc08g067410.1.1 Tomato plasma membrane 75.24 77.62
CDX70186 Canola plastid 76.39 77.58
PGSC0003DMT400019029 Potato plasma membrane 75.05 77.43
GSMUA_Achr7P08410_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 57.77 76.98
Bra009413.1-P Field mustard cytosol, golgi, plasma membrane 76.2 76.79
CDX98800 Canola plastid 76.2 76.64
KRH63016 Soybean cytosol, peroxisome, plasma membrane 74.47 76.08
KRH54862 Soybean cytosol, peroxisome, plasma membrane 73.51 75.1
Solyc12g006820.1.1 Tomato plasma membrane 71.21 74.2
PGSC0003DMT400002734 Potato cytosol, peroxisome, plasma membrane 71.21 72.6
TraesCS6B01G098300.1 Wheat endoplasmic reticulum, peroxisome, plasma membrane 67.18 68.23
VIT_11s0016g04700.t01 Wine grape plastid 78.12 65.96
TraesCS1B01G436300.1 Wheat endoplasmic reticulum, plasma membrane, plastid 65.64 65.14
TraesCS1B01G387800.2 Wheat plasma membrane 54.51 56.69
TraesCS6B01G473900.1 Wheat mitochondrion 54.51 56.35
TraesCS4B01G278800.1 Wheat golgi 55.09 56.27
TraesCS4B01G225500.1 Wheat peroxisome 57.2 54.58
TraesCS1B01G421100.1 Wheat golgi 47.02 52.8
TraesCS4B01G297500.1 Wheat golgi 53.93 52.04
TraesCS6B01G324200.1 Wheat plasma membrane 46.83 50.41
TraesCS7B01G113000.1 Wheat golgi 46.07 48.88
TraesCS7B01G449000.1 Wheat golgi 45.68 48.87
TraesCS4B01G274700.1 Wheat plastid 44.72 48.64
TraesCS7B01G449300.1 Wheat plasma membrane 44.15 48.12
TraesCS3B01G488500.1 Wheat plasma membrane 44.34 47.14
TraesCS6B01G373000.1 Wheat endoplasmic reticulum, golgi 36.85 46.04
TraesCS7B01G113100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 39.73 46.0
TraesCS6B01G372900.1 Wheat golgi 44.15 45.73
TraesCS6B01G036000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 41.84 44.67
TraesCS1B01G053700.1 Wheat endoplasmic reticulum 42.61 44.67
TraesCS7B01G113200.1 Wheat golgi 42.23 44.27
TraesCS1B01G048000.1 Wheat endoplasmic reticulum, golgi, plasma membrane 41.27 44.06
TraesCS2B01G535700.1 Wheat endoplasmic reticulum, plasma membrane 38.39 43.67
TraesCS2B01G535600.1 Wheat golgi, mitochondrion 40.12 43.09
TraesCS7B01G006100.1 Wheat mitochondrion 39.92 42.71
TraesCS7B01G006300.1 Wheat golgi 38.77 41.48
TraesCS3B01G313800.1 Wheat endoplasmic reticulum, golgi, plasma membrane 39.73 40.91
TraesCS1B01G443100.1 Wheat cytosol 7.49 17.65
Protein Annotations
KEGG:00061+2.3.1.180KEGG:00062+2.3.1.199InterPro:3-ktacl-CoA_synGene3D:3.40.47.10MapMan:5.1.6.1.1InterPro:ACP_syn_III_C
InterPro:FAE1_typ3_polyketide_synthGO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0006629GO:GO:0006633
GO:GO:0008150GO:GO:0008152GO:GO:0009058GO:GO:0009987GO:GO:0016020GO:GO:0016740
GO:GO:0016747InterPro:IPR016039PFAM:PF08392PFAM:PF08541PIRSF:PIRSF036417PANTHER:PTHR31561
PANTHER:PTHR31561:SF8SUPFAM:SSF53901TMHMM:TMhelixInterPro:Thiolase-likeEnsemblPlantsGene:TraesCS7B01G254900EnsemblPlants:TraesCS7B01G254900.1
TIGR:cd00831SEG:seg::::
Description
No Description!
Coordinates
chr7B:-:470835239..470837054
Molecular Weight (calculated)
57973.4 Da
IEP (calculated)
8.627
GRAVY (calculated)
-0.056
Length
521 amino acids
Sequence
(BLAST)
001: MDSPAPNAAN PPAPAAEPAA QPRLLPDFLQ SVRLKYVKLG YHHLISHGMY LLLSPLMALV AVQLSTVSPG DLADLWEQLR FNLVSVLVCS TLLVFLSTVY
101: FLTRPRPVYL VDFACYKPEP ERRCTRQTFM RCSEATGSFT DANLDFQRKI LERSGLGEDT YLPPAVLRVP PNPCMDEARK EASTVMFGAI DQLLEKTGVR
201: PKDIGILVVN CSLFNPTPSL SAMVVNHYRL RGNIVSYNLG GMGCSAGLLS IDLAKDLLQV HPNSYALVIS MENITLNWYF GNDRSMLVSN CLFRMGGAAI
301: LLSNRRSDRR RSKYELVHTV RTHKGADDKC FGCVTQQEDE AGKVGVSLSK DLMAVAGDAL KTNITTLGPL VLPLSEQLLF MATLVAKKAF KVKIKPYIPD
401: FKLAFEHFCI HAGGRAVLDE LEKNLGLTEW HMEPSRMTLY RFGNTSSSSL WYELAYSEAK GRIGRRDRVW QIAFGSGFKC NSAVWRALRT VAPEAEEKNP
501: WADEIDRFPV EVPRVSRVGS A
Best Arabidopsis Sequence Match ( AT2G26640.1 )
(BLAST)
001: MDVEQKKPLI ESSDRNLPDF KKSVKLKYVK LGYHYLITHG MYLFLSPLVL VIAAQISTFS VTDLRSLWEH LQYNLISVVV CSMLLVFLMT IYFMTRPRPV
101: YLVNFSCFKP DESRKCTKKI FMDRSKLTGS FTEENLEFQR KILQRSGLGE STYLPEAVLN VPPNPCMKEA RKEAETVMFG AIDELLAKTN VNPKDIGILI
201: VNCSLFNPTP SLSAMVVNHY KLRGNILSYN LGGMGCSAGL ISIDLAKHLL HSIPNTYAMV ISMENITLNW YFGNDRSKLV SNCLFRMGGA AILLSNKRWD
301: RRRSKYELVD TVRTHKGADD KCFGCITQEE DSASKIGVTL SKELMAVAGD ALKTNITTLG PLVLPTSEQL LFFATLVGRK LFKMKIKPYI PDFKLAFEHF
401: CIHAGGRAVL DELEKNLKLT EWHMEPSRMT LYRFGNTSSS SLWYELAYSE AKGRIKKGDR IWQIAFGSGF KCNSSVWRAV RSVNPKKEKN PWMDEIHEFP
501: VEVPKVSTI
Arabidopsis Description
KCS113-ketoacyl-CoA synthase 11 [Source:UniProtKB/Swiss-Prot;Acc:O48780]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.