Factsheet for Os05t0398100-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os02t0746000-01
Os04t0185100-01
Os10t0402200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13060.1	Os02t0746000-01	AT1G26830.1	15659098
AT5G13060.1	Os02t0746000-01	AT1G69670.1	15659098
AT5G13060.1	Os04t0185100-01	AT2G31270.1	18818695
AT5G13060.1	Os10t0402200-01	AT5G16690.1	18818695

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70871	Canola	cytosol	64.73	54.31
PGSC0003DMT400051857	Potato	endoplasmic reticulum	38.84	47.54
HORVU1Hr1G062160.1	Barley	cytosol	88.39	27.5
TraesCS1A01G249400.1	Wheat	cytosol	89.29	27.32
TraesCS1B01G260100.1	Wheat	cytosol	89.73	27.09
TraesCS1D01G248900.1	Wheat	cytosol	89.29	26.95
EES19490	Sorghum	nucleus	84.38	25.37
GSMUA_Achr9P17600_001	Banana	cytosol	83.48	25.13
KRH77872	Soybean	cytosol	75.89	24.08
KRH27617	Soybean	cytosol	75.45	23.87
Zm00001d038134_P001	Maize	cytosol	83.93	23.65
CDX92539	Canola	cytosol	73.66	23.54
KRG91259	Soybean	cytosol	73.66	23.34
KRH35552	Soybean	cytosol	73.66	23.34
VIT_07s0104g00020.t01	Wine grape	cytosol	73.21	23.26
VIT_05s0020g03020.t01	Wine grape	cytosol	73.21	23.0
CDX88895	Canola	cytosol, nucleus, plastid	73.21	22.94
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	73.21	22.94
PGSC0003DMT400051860	Potato	cytosol	72.32	22.85
Bra002228.1-P	Field mustard	nucleus	73.66	22.79
AT5G19330.1	Thale cress	cytosol	70.54	22.25
PGSC0003DMT400033530	Potato	cytosol	70.09	22.18
Solyc06g084250.2.1	Tomato	cytosol	69.64	22.13
Solyc09g065210.2.1	Tomato	cytosol	69.64	22.03
Zm00001d010341_P002	Maize	cytosol	73.66	21.51
KRG95533	Soybean	cytosol	56.25	17.67
KRH67208	Soybean	cytosol	55.36	17.59
Os08t0198300-01	Rice	cytosol	27.23	17.04
Os06t0668400-01	Rice	cytosol	27.23	16.76
Os06t0251200-01	Rice	cytosol	25.89	16.48
Bra023389.1-P	Field mustard	plastid	47.32	16.28
Os06t0668300-00	Rice	cytosol	24.55	16.04
CDX69674	Canola	cytosol	47.32	14.99
Bra008860.1-P	Field mustard	plastid	46.88	14.85
CDX97221	Canola	cytosol, mitochondrion	46.43	14.71
CDX85673	Canola	plastid	47.32	14.46
CDX91149	Canola	cytosol, mitochondrion	45.54	13.99
AT5G13060.1	Thale cress	cytosol, mitochondrion, plastid	45.98	13.98
CDY13990	Canola	nucleus	73.21	12.96
Bra030036.1-P	Field mustard	plastid	6.25	7.78
CDY51336	Canola	mitochondrion	4.02	3.85
CDY15719	Canola	plastid	0.89	1.44

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0P0WM47	ProteinID:BAS93898.1	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005737	InterPro:IPR000210	EnsemblPlantsGene:Os05g0398100	EnsemblPlants:Os05t0398100-01	PFAM:PF00651	PFscan:PS50097
PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI000393B41B
SEG:seg	:	:	:	:	:

Description

Similar to predicted protein. (Os05t0398100-01)

Coordinates

chr5:-:19368978..19371718

Molecular Weight (calculated)

25270.4 Da

IEP (calculated)

6.021

GRAVY (calculated)

-0.037

Length

224 amino acids

Sequence
(BLAST)

001: LLLDLLVSVS LKHQLDGSVA LYKLANKAAA LSPMDAAPPS PTPQVYLGEQ YVNSSTLSDV TFLVEGKRFY AHRIALLASS DAFRAMFDGG YREKDARDIE
101: IPNIRWNVFE LMMRFIYTGS VEVTSDISQD LLRAADQYLL EGLKRLCEYT IAQDVNVDNV SDMYDLSEAF HAMSLRHTCV LFILEQFEKI CVKSGSSQLI
201: QRVIPELRNF FAKALRPSHR NAQP

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.