CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77872	Soybean	cytosol	97.18	97.45
KRH35552	Soybean	cytosol	88.98	89.11
KRG91259	Soybean	cytosol	88.56	88.68
VIT_05s0020g03020.t01	Wine grape	cytosol	83.76	83.17
AT5G19330.1	Thale cress	cytosol	79.52	79.3
CDX92539	Canola	cytosol	78.25	79.03
Bra002228.1-P	Field mustard	nucleus	79.66	77.9
CDX88895	Canola	cytosol, nucleus, plastid	78.39	77.62
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	78.39	77.62
Os05t0398100-01	Rice	cytosol	23.87	75.45
GSMUA_Achr9P17600_001	Banana	cytosol	78.39	74.6
HORVU1Hr1G062160.1	Barley	cytosol	75.28	74.03
TraesCS1A01G249400.1	Wheat	cytosol	75.42	72.95
TraesCS1B01G260100.1	Wheat	cytosol	75.56	72.1
EES19490	Sorghum	nucleus	75.85	72.08
TraesCS1D01G248900.1	Wheat	cytosol	75.42	71.97
GSMUA_Achr10P...	Banana	endoplasmic reticulum	37.43	67.95
Zm00001d038134_P001	Maize	cytosol	75.0	66.79
Zm00001d010341_P002	Maize	cytosol	71.61	66.1
GSMUA_Achr10P...	Banana	cytosol	15.4	63.01
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	20.76	59.27
KRG95533	Soybean	cytosol	59.18	58.77
KRH67208	Soybean	cytosol	58.47	58.72
GSMUA_Achr10P...	Banana	cytosol	16.53	58.5
GSMUA_Achr2P00090_001	Banana	cytosol	14.97	56.68
GSMUA_Achr2P00100_001	Banana	cytosol	14.69	55.91
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	14.55	50.99
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	28.39	46.31
CDY13990	Canola	nucleus	77.82	43.56
KRH48502	Soybean	cytosol	9.18	42.48

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100819832	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02006730	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_11G004300	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
UniProt:I1LFS7	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	ProteinID:KRH27616.1	EnsemblPlants:KRH27617
ProteinID:KRH27617	ProteinID:KRH27617.1	PFAM:PF00514	PFAM:PF00651	PFscan:PS50097	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371
SUPFAM:SSF54695	UniParc:UPI000233CCF3	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:315555..324198

Molecular Weight (calculated)

78364.6 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.149

Length

708 amino acids

Sequence
(BLAST)

001: MELQRRPDQC LPERKGQKRK LEEEFDDDPQ ISPPPTGDAR DALLSDVKEQ VSLLDSTFSW NEPDRAAAKR ATHALADLAK NEEVVNVIVE GGAIPALVKH
101: LQVPPLPLPE TDRVPRPMPF EHEVEKGSAF ALGLLAVKPE HQQLIVDSGA LKHLVDLLKR HKNGLTSRAI NSLIRRAADA ITNLAHENSS IKTRVRKEGG
201: IPPLVHLLEF ADTKVQRAAA GALRTLAFKN DENKNQIVEC NALPTLILML CSEDAAIHYE AVGVIGNLVH SSPDIKKEVL LAGALQPVIG LLSSCCSESQ
301: REAALLLGQF AATDSDCKVH IVQRGAVRPL IEMLQSSDVQ LKEMSAFALG RLAQDTHNQA GIAHNGGLMP LLKLLDSKNG SLQHNAAFAL YGLADNEDNV
401: SDFIRVGGIQ RLQDGEFIVQ ATKDCVAKTL KRLEEKIHGR VLNHLLYLMR VSEKAFQRRV ALTLAHLCSA DDQRKIFIDY NGLELLMGLL GSYNPKQQLD
501: GAVALCKLAN KAMTLSPVDA APPSPTPQVY LGEQYVNNVT LSDVTFLVEG KRFYAHRICL LASSDAFRAM FDGGYREKEA RDIEIPNIRW EVFEPMMRFI
601: YTGSVDITLD IAQDLLRAAD QYLLEGLKRL CEYTIAQDIS LENVSSMYEL SEAFNAISLR HTCILFILEH YDKLSGKPGH SHLIQRIIPE IQNYFVKALT
701: KANSNILP

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.