CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27617	Soybean	cytosol	97.45	97.18
KRH35552	Soybean	cytosol	88.81	88.68
KRG91259	Soybean	cytosol	88.39	88.26
VIT_05s0020g03020.t01	Wine grape	cytosol	83.99	83.17
AT5G19330.1	Thale cress	cytosol	79.6	79.15
CDX92539	Canola	cytosol	78.47	79.03
Bra002228.1-P	Field mustard	nucleus	79.89	77.9
CDX88895	Canola	cytosol, nucleus, plastid	78.19	77.2
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	78.05	77.06
Os05t0398100-01	Rice	cytosol	24.08	75.89
GSMUA_Achr9P17600_001	Banana	cytosol	78.33	74.33
HORVU1Hr1G062160.1	Barley	cytosol	75.35	73.89
TraesCS1A01G249400.1	Wheat	cytosol	75.64	72.95
EES19490	Sorghum	nucleus	76.2	72.21
TraesCS1B01G260100.1	Wheat	cytosol	75.78	72.1
TraesCS1D01G248900.1	Wheat	cytosol	75.64	71.97
GSMUA_Achr10P...	Banana	endoplasmic reticulum	37.11	67.18
Zm00001d038134_P001	Maize	cytosol	75.35	66.92
Zm00001d010341_P002	Maize	cytosol	72.24	66.49
GSMUA_Achr10P...	Banana	cytosol	15.58	63.58
KRG95533	Soybean	cytosol	59.63	59.05
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	20.68	58.87
KRH67208	Soybean	cytosol	58.78	58.87
GSMUA_Achr10P...	Banana	cytosol	16.57	58.5
GSMUA_Achr2P00090_001	Banana	cytosol	15.01	56.68
GSMUA_Achr2P00100_001	Banana	cytosol	14.73	55.91
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	14.73	51.49
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	28.33	46.08
CDY13990	Canola	nucleus	78.05	43.56
KRH48502	Soybean	cytosol	9.35	43.14

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100812456	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02000685	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_01G239200	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
UniProt:I1JAU7	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	EnsemblPlants:KRH77872	ProteinID:KRH77872
ProteinID:KRH77872.1	PFAM:PF00514	PFAM:PF00651	PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315
PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695
UniParc:UPI00023BE14E	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:56343006..56350205

Molecular Weight (calculated)

78108.3 Da

IEP (calculated)

6.619

GRAVY (calculated)

-0.141

Length

706 amino acids

Sequence
(BLAST)

001: MELQRRPDQC LPVRKGLKRK LEEEFDDDPQ ISAPPTGDAR DALLSDVKEQ VSLLDSNFSW NEHDRAAAKR ATHALADLAK NEEVVNVIVE GGAIPALVKH
101: LQAPPLAESD RLPRPMPFEH EVEKGSAFAL GLLAVKPEHQ QLIVDSGALK HLVDLLKRHK NGLTSRAINS LIRRAADAIT NLAHENSSIK TRVRKEGGIP
201: PLVHLLEFAD TKVQRAAAGA LRTLAFKNDE NKNQIVECNA LPTLILMLRS EDAAIHYEAV GVIGNLVHSS PDIKKEVLLA GALQPVIGLL SSCCSESQRE
301: AALLLGQFAA TDSDCKVHIV QRGAVRPLIE MLQSSDVQLK EMSAFALGRL AQDTHNQAGI VHNGGLMPLL KLLDSKNGSL QHNAAFALYG LADNEDNVSD
401: FIRVGGIQRL QDGEFIVQAT KDCVAKTLKR LEEKIHGRVL NHLLYLMRVS EKAFQRRVAL TLAHLCSADD QRKIFIDYNG LELLMGLLGS YNPKQQLDGA
501: VALCKLANKA MTLSPVDAAP PSPTPQVYLG EQYVNNATLS DVTFLVEGKR FYAHRICLLA SSDAFRAMFD GGYREKEARD IEIPNIRWEV FELMMRFIYT
601: GSVDITLDIA QDLLRAADQY LLEGLKRLCE YTIAQDISLE NVSSMYELSE AFNAISLRHT CILFILEHYD KLGGKPGHSQ LIQHIIPEIQ NYFVKAITKA
701: NSNIQP

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.