Factsheet for HORVU1Hr1G062160.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G003370.11
HORVU2Hr1G029330.11
HORVU3Hr1G033880.2
HORVU4Hr1G047140.6
HORVU6Hr1G075720.2
HORVU7Hr1G031190.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13060.1	HORVU6Hr1G075720.2	AT1G26830.1	15659098
AT5G13060.1	HORVU6Hr1G075720.2	AT1G69670.1	15659098
AT5G13060.1	HORVU2Hr1G003370.11	AT2G31270.1	18818695
AT5G13060.1	HORVU4Hr1G047140.6	AT2G31270.1	18818695
AT5G13060.1	HORVU3Hr1G033880.2	AT4G14700.1	18818695
AT5G13060.1	HORVU7Hr1G031190.2	AT4G14700.1	18818695
AT5G13060.1	HORVU2Hr1G029330.11	AT5G16690.1	18818695

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G249400.1	Wheat	cytosol	98.06	96.45
TraesCS1B01G260100.1	Wheat	cytosol	98.61	95.69
TraesCS1D01G248900.1	Wheat	cytosol	98.33	95.42
Os05t0398100-01	Rice	cytosol	27.5	88.39
EES19490	Sorghum	nucleus	85.56	82.68
GSMUA_Achr9P17600_001	Banana	cytosol	80.69	78.09
Zm00001d010341_P002	Maize	cytosol	81.53	76.53
VIT_05s0020g03020.t01	Wine grape	cytosol	75.14	75.88
Zm00001d038134_P001	Maize	cytosol	83.33	75.47
KRH77872	Soybean	cytosol	73.89	75.35
KRH27617	Soybean	cytosol	74.03	75.28
KRG91259	Soybean	cytosol	73.06	74.4
KRH35552	Soybean	cytosol	72.78	74.12
AT5G19330.1	Thale cress	cytosol	72.36	73.38
PGSC0003DMT400051860	Potato	cytosol	71.94	73.06
CDX92539	Canola	cytosol	70.97	72.9
CDX88895	Canola	cytosol, nucleus, plastid	72.22	72.73
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	72.08	72.59
Bra002228.1-P	Field mustard	nucleus	72.92	72.51
Solyc06g084250.2.1	Tomato	cytosol	70.69	72.2
Solyc09g065210.2.1	Tomato	cytosol	70.28	71.47
PGSC0003DMT400033530	Potato	cytosol	70.28	71.47
VIT_07s0104g00020.t01	Wine grape	cytosol	69.72	71.21
CDX70871	Canola	cytosol	21.67	58.43
KRH67208	Soybean	cytosol	56.11	57.3
KRG95533	Soybean	cytosol	56.11	56.66
CDX97221	Canola	cytosol, mitochondrion	51.53	52.48
CDX69674	Canola	cytosol	51.39	52.33
PGSC0003DMT400051857	Potato	endoplasmic reticulum	13.19	51.91
AT5G13060.1	Thale cress	cytosol, mitochondrion, plastid	51.94	50.75
CDX91149	Canola	cytosol, mitochondrion	50.97	50.34
CDX85673	Canola	plastid	51.11	50.2
Bra008860.1-P	Field mustard	plastid	48.89	49.79
Bra023389.1-P	Field mustard	plastid	42.92	47.47
CDY51336	Canola	mitochondrion	13.47	41.45
CDY13990	Canola	nucleus	70.97	40.4
CDY15719	Canola	plastid	7.08	36.69
Bra030036.1-P	Field mustard	plastid	9.03	36.11
HORVU7Hr1G108200.1	Barley	cytosol	6.25	34.09
HORVU7Hr1G107980.3	Barley	cytosol, plastid	9.44	26.25
HORVU7Hr1G108090.1	Barley	cytosol	10.56	21.23
HORVU7Hr1G108000.1	Barley	cytosol	10.42	20.11
HORVU7Hr1G107780.4	Barley	cytosol	10.0	19.51
HORVU7Hr1G094540.2	Barley	cytosol	12.92	17.29

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A287FWE2	InterPro:ARM-like	InterPro:ARM-type_fold
InterPro:Armadillo	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU1Hr1G062160
EnsemblPlants:HORVU1Hr1G062160.1	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	PFAM:PF00514	PFAM:PF00651
PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185
SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695	UniParc:UPI000B4761E5	SEG:seg	:

Description

No Description!

Coordinates

chrchr1H:-:448240781..448257308

Molecular Weight (calculated)

79276.1 Da

IEP (calculated)

6.011

GRAVY (calculated)

-0.139

Length

720 amino acids

Sequence
(BLAST)

001: MEAEQQKPQR PRRKAQKRRI DDEXSPLGSA DADDDNEDDE GSVGTEICCR QSQAAVAREV RTQVDALHHC FSWRHADRAT AKRATSVLAE LAKNEEMVNV
101: IVEGGAVPAL VCHLKVPPME AAVEEEQQPR PFEHEVEKGA AFALGLLAVK PEYQQLIVDA GALPLLVHLL RSHKNATNSR AVNSLIRRAA DAITNLAHEN
201: SNIKTCIRIE GGIPPLVELL ESQDIKVQRA AAGALRTLAF KNDENKTLIV DCNALPTLIL MLRSEDAAIH FEAVGVIGNL VHSSPNIKKE VLNAGALQPV
301: IGLLSSCCTE SQREAALLLG QFASADSECK VHIVQRGAVR PLIDMLQSAD FQLREMSAFA LGRLAQDTHN QAGIAYNGGL LPLLKLLDSK NGSLQHNAAF
401: ALYGVADNED YVSDFVKVGG VQKLQDGEFI VQATKDCVAK TLKRLEEKIN GRVLKHLVYL MRVGEKSVQR RVALALAHLC APEDQRTIFI DNNGLDLLLD
501: LLVSVSSKHQ QDGSVALYKL ANKAAALSPM DAAPPSPTPQ VYLGEQYVNS STLSDVTFLV EGKLFYAHRI ALLASSDAFR AMFDGGYREK DARDIEIPNI
601: RWDVFELMMR FIYTGSVEVT NELAQDLLRA ADQYLLEGLK RLCEYTIAQD VNLENVSDMY DLSEAFHAMS LRHTCVLFIL EQFDKICTRP GFSQLIQRVI
701: PELRNFFAKA LTPSHRSAQP

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.