CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 2
extracellular 2
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	extracellular, plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030036.1-P	Field mustard	plastid	71.22	55.0
CDY51336	Canola	mitochondrion	48.2	28.63
GSMUA_Achr10P...	Banana	cytosol	15.83	12.72
GSMUA_Achr2P00100_001	Banana	cytosol	15.83	11.83
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	16.55	11.39
CDX69674	Canola	cytosol	51.08	10.04
CDX97221	Canola	cytosol, mitochondrion	51.08	10.04
CDX91149	Canola	cytosol, mitochondrion	48.92	9.33
CDX85673	Canola	plastid	48.2	9.14
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	14.39	8.06
Solyc09g065210.2.1	Tomato	cytosol	39.57	7.77
CDX92539	Canola	cytosol	38.13	7.56
Solyc06g084250.2.1	Tomato	cytosol	38.13	7.52
GSMUA_Achr9P17600_001	Banana	cytosol	38.13	7.12
VIT_07s0104g00020.t01	Wine grape	cytosol	35.97	7.09
HORVU1Hr1G062160.1	Barley	cytosol	36.69	7.08
CDX88895	Canola	cytosol, nucleus, plastid	35.97	6.99
EES19490	Sorghum	nucleus	37.41	6.98
TraesCS1A01G249400.1	Wheat	cytosol	36.69	6.97
TraesCS1D01G248900.1	Wheat	cytosol	36.69	6.87
TraesCS1B01G260100.1	Wheat	cytosol	36.69	6.87
Zm00001d010341_P002	Maize	cytosol	36.69	6.65
Zm00001d038134_P001	Maize	cytosol	37.41	6.54
KRG95533	Soybean	cytosol	32.37	6.31
KRH67208	Soybean	cytosol	30.22	5.96
GSMUA_Achr10P...	Banana	cytosol	7.91	5.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum	14.39	5.13
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	15.11	4.84
CDY13990	Canola	nucleus	38.13	4.19
CDX70872	Canola	cytosol	9.35	3.36
GSMUA_Achr2P00090_001	Banana	cytosol	2.88	2.14
CDX70871	Canola	cytosol	2.88	1.5
Os05t0398100-01	Rice	cytosol	1.44	0.89

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	GO:A0A078FS43	UniProt:A0A078FS43	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY15719	ProteinID:CDY15719	ProteinID:CDY15719.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0016020	GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00089945001	InterPro:IPR011989	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164
SUPFAM:SSF48371	TMHMM:TMhelix	UniParc:UPI0004EECE8A	SEG:seg	:	:

Description

BnaA07g08900DBnaA07g08900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FS43]

Coordinates

chrLK032056:-:729807..731038

Molecular Weight (calculated)

15988.7 Da

IEP (calculated)

8.445

GRAVY (calculated)

0.217

Length

139 amino acids

Sequence
(BLAST)

001: MAIPLVPYTM VNVTALGNIR DPYLKRSLTF FTWSNLTLVL LWVVIIFLIY YTKNMSREVH IAQRGAITPL IKMLQSSDEQ VVEMSAFALG LADNEENLAD
101: FIKAGNIQRL QDDNFTVQPI RDCVVRTLKR LETRFMGLY

Best Arabidopsis Sequence Match ( AT5G13060.1 )
(BLAST)

001: MIISKSFKAP LKFSVKSSTA PVISNHPPME NHPKRQRTTR LAARNLKRKL SHNTDGAPIV TQLIDIDDEP IDLVVAIRRH VEVLNSSFSD PDFDHEAVKE
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV

Arabidopsis Description

ABAP1ARMADILLO BTB ARABIDOPSIS PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:B7U179]
SUBAcon: [cytosol,plastid,mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.