Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G13060.1 | EES05529 | AT1G26830.1 | 15659098 |
| AT5G13060.1 | EES05529 | AT1G69670.1 | 15659098 |
| AT5G13060.1 | EER89201 | AT2G31270.1 | 18818695 |
| AT5G13060.1 | OQU75979 | AT4G14700.1 | 18818695 |
| AT5G13060.1 | EES17403 | AT5G16690.1 | 18818695 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d010341_P002 | Maize | cytosol | 93.29 | 90.61 |
| Zm00001d038134_P001 | Maize | cytosol | 95.03 | 89.06 |
| HORVU1Hr1G062160.1 | Barley | cytosol | 82.68 | 85.56 |
| TraesCS1A01G249400.1 | Wheat | cytosol | 84.03 | 85.52 |
| TraesCS1B01G260100.1 | Wheat | cytosol | 85.1 | 85.44 |
| TraesCS1D01G248900.1 | Wheat | cytosol | 84.83 | 85.18 |
| Os05t0398100-01 | Rice | cytosol | 25.37 | 84.38 |
| GSMUA_Achr9P17600_001 | Banana | cytosol | 78.52 | 78.63 |
| VIT_05s0020g03020.t01 | Wine grape | cytosol | 74.77 | 78.12 |
| KRH77872 | Soybean | cytosol | 72.21 | 76.2 |
| KRH27617 | Soybean | cytosol | 72.08 | 75.85 |
| KRG91259 | Soybean | cytosol | 71.14 | 74.96 |
| AT5G19330.1 | Thale cress | cytosol | 71.28 | 74.79 |
| CDX92539 | Canola | cytosol | 70.34 | 74.75 |
| KRH35552 | Soybean | cytosol | 70.87 | 74.68 |
| Bra002228.1-P | Field mustard | nucleus | 72.21 | 74.31 |
| CDX88895 | Canola | cytosol, nucleus, plastid | 70.87 | 73.85 |
| Bra006500.1-P | Field mustard | cytosol, nucleus, plastid | 70.74 | 73.71 |
| PGSC0003DMT400051860 | Potato | cytosol | 69.66 | 73.2 |
| Solyc06g084250.2.1 | Tomato | cytosol | 68.59 | 72.48 |
| PGSC0003DMT400033530 | Potato | cytosol | 68.59 | 72.18 |
| Solyc09g065210.2.1 | Tomato | cytosol | 68.59 | 72.18 |
| VIT_07s0104g00020.t01 | Wine grape | cytosol | 68.05 | 71.91 |
| CDX70871 | Canola | cytosol | 20.81 | 58.05 |
| KRH67208 | Soybean | cytosol | 54.36 | 57.45 |
| KRG95533 | Soybean | cytosol | 54.63 | 57.08 |
| CDX69674 | Canola | cytosol | 51.14 | 53.89 |
| CDX97221 | Canola | cytosol, mitochondrion | 51.14 | 53.89 |
| AT5G13060.1 | Thale cress | cytosol, mitochondrion, plastid | 51.41 | 51.97 |
| Bra008860.1-P | Field mustard | plastid | 49.13 | 51.77 |
| PGSC0003DMT400051857 | Potato | endoplasmic reticulum | 12.62 | 51.37 |
| CDX91149 | Canola | cytosol, mitochondrion | 50.2 | 51.3 |
| CDX85673 | Canola | plastid | 50.2 | 51.02 |
| Bra023389.1-P | Field mustard | plastid | 42.28 | 48.39 |
| CDY51336 | Canola | mitochondrion | 13.29 | 42.31 |
| CDY13990 | Canola | nucleus | 70.2 | 41.34 |
| CDY15719 | Canola | plastid | 6.98 | 37.41 |
| Bra030036.1-P | Field mustard | plastid | 8.86 | 36.67 |
| OQU76847 | Sorghum | cytosol | 7.11 | 23.87 |
| OQU76843 | Sorghum | cytosol | 9.26 | 22.04 |
| OQU76846 | Sorghum | cytosol | 7.65 | 20.14 |
| KXG20568 | Sorghum | cytosol | 9.66 | 19.78 |
| KXG19711 | Sorghum | cytosol | 7.79 | 19.4 |
| EER90192 | Sorghum | cytosol | 8.72 | 19.06 |
| EER98422 | Sorghum | cytosol | 9.26 | 19.06 |
| OQU76844 | Sorghum | cytosol | 9.53 | 18.93 |
| OQU79162 | Sorghum | cytosol, plastid | 8.72 | 18.62 |
| KXG20567 | Sorghum | cytosol | 8.86 | 18.18 |
| EER90188 | Sorghum | cytosol | 8.72 | 17.62 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:8085098 | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Armadillo | InterPro:BTB/POZ_dom | UniProt:C5YXL9 | EnsemblPlants:EES19490 | ProteinID:EES19490 | ProteinID:EES19490.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | InterPro:IPR000210 | InterPro:IPR000225 | InterPro:IPR011989 | PFAM:PF00514 |
| PFAM:PF00651 | PFscan:PS50097 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF164 | InterPro:SKP1/BTB/POZ_sf |
| SMART:SM00185 | SMART:SM00225 | EnsemblPlantsGene:SORBI_3009G129600 | SUPFAM:SSF48371 | SUPFAM:SSF54695 | unigene:Sbi.5925 |
| UniParc:UPI0001A89323 | RefSeq:XP_002441060.1 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:48291981..48305169
Molecular Weight (calculated)
81136.3 Da
IEP (calculated)
6.675
GRAVY (calculated)
-0.146
Length
745 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEQQKQPQ RPRRKGQKRK LEDEASAAAA AAAAAAVAAA ASSLGSAGAD DDNEEEDGSA GTPEICCRHS HAALAREVRV QVDVLVRCAS SWRHADRAAA
101: KRATHVLAEL AKNEEVVNVI VEGGAVAALV CHLEEPAVAA PTQEEQQLRP FEHEVEKGAA FALGLLAVKP EHQQLIVDAG ALPPLVKLLK RQKNTTNSRV
201: VNSVIKRAAD AITNLAHENS NIKTSVRMEG GIPPLVELLE SQDLKVQRAA AGALRTLAFK NDENKTQIVQ CNALPTLILM LRSEDAAIHY EAVGVIGNLV
301: HSSPNIKKEV LNAGALQPVI GLLSSCCTES QREAALLLGQ FASADSDCKV HIVQRGAVRP LIEMLQSADV QLREMSAFAL GRLAQDTHNQ AGIAYNGGLA
401: PLLKLLDSKN GSLQHNAAFA LYGVADNEDY VSDFIKVGGV QKLQDGEFIV QATKDCVAKT LKRLEEKING RVLKHLLYLM RVGEKSVQRR VALALAHLCA
501: PEDQRTIFID NNGLDLLLDL LISMSSKHQQ DGSAALYKLA NKAAALSPMD AAPPSPTPQV YLGEQYVNSS TLSDVTFLVE GKRFYAHRIA LLASSDAFRA
601: MFDGGYREKD ARDIEIPNIK WEVFELMMRF IYTGSVQVTS EIAQDLLRAA DQYLLEGLKR LCEYTIAKDV NLDNVSDMYD LSEAFHAVSL RHTCILYILE
701: HFNKICTRAG SPQLIQRVIP ELRNFLTKAL SSSRSPSPSD RNSQI
101: KRATHVLAEL AKNEEVVNVI VEGGAVAALV CHLEEPAVAA PTQEEQQLRP FEHEVEKGAA FALGLLAVKP EHQQLIVDAG ALPPLVKLLK RQKNTTNSRV
201: VNSVIKRAAD AITNLAHENS NIKTSVRMEG GIPPLVELLE SQDLKVQRAA AGALRTLAFK NDENKTQIVQ CNALPTLILM LRSEDAAIHY EAVGVIGNLV
301: HSSPNIKKEV LNAGALQPVI GLLSSCCTES QREAALLLGQ FASADSDCKV HIVQRGAVRP LIEMLQSADV QLREMSAFAL GRLAQDTHNQ AGIAYNGGLA
401: PLLKLLDSKN GSLQHNAAFA LYGVADNEDY VSDFIKVGGV QKLQDGEFIV QATKDCVAKT LKRLEEKING RVLKHLLYLM RVGEKSVQRR VALALAHLCA
501: PEDQRTIFID NNGLDLLLDL LISMSSKHQQ DGSAALYKLA NKAAALSPMD AAPPSPTPQV YLGEQYVNSS TLSDVTFLVE GKRFYAHRIA LLASSDAFRA
601: MFDGGYREKD ARDIEIPNIK WEVFELMMRF IYTGSVQVTS EIAQDLLRAA DQYLLEGLKR LCEYTIAKDV NLDNVSDMYD LSEAFHAVSL RHTCILYILE
701: HFNKICTRAG SPQLIQRVIP ELRNFLTKAL SSSRSPSPSD RNSQI
001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL
Arabidopsis Description
ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.