CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90192	Sorghum	cytosol	70.72	46.04
KXG20568	Sorghum	cytosol	62.16	37.91
EER90188	Sorghum	cytosol	59.46	35.77
EER98422	Sorghum	cytosol	53.6	32.87
OQU76843	Sorghum	cytosol	45.95	32.59
KXG20567	Sorghum	cytosol	49.1	30.03
OQU79162	Sorghum	cytosol, plastid	45.5	28.94
OQU76844	Sorghum	cytosol	48.65	28.8
OQU76846	Sorghum	cytosol	29.28	22.97
KXG19711	Sorghum	cytosol	30.63	22.74
GSMUA_Achr10P...	Banana	extracellular	8.11	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.7	9.52
KRH48502	Soybean	cytosol	6.31	9.15
GSMUA_Achr2P00070_001	Banana	extracellular	4.95	7.19
EES19490	Sorghum	nucleus	23.87	7.11
Bra002227.1-P	Field mustard	cytosol	9.01	3.71
CDX70872	Canola	cytosol	6.31	3.62

Protein Annotations

EnsemblPlants:OQU76847	EnsemblPlantsGene:SORBI_3010G222501	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:BPM_C	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR26379
PANTHER:PTHR26379:SF180	PFAM:PF00651	PFscan:PS50097	ProteinID:OQU76847	ProteinID:OQU76847.1	SMART:SM00225
SUPFAM:SSF54695	UniParc:UPI0009DC8204	UniProt:A0A1W0VU79	MapMan:35.1	:	:

Description

hypothetical protein

Coordinates

chr10:-:56471184..56472365

Molecular Weight (calculated)

24715.5 Da

IEP (calculated)

5.776

GRAVY (calculated)

-0.152

Length

222 amino acids

Sequence
(BLAST)

001: MEHGRTQGAA AEDRRLLRHR TAALESSEYI KSKWIVDGHE WELWRGQQGA DVTFVLESGE RFVAHKAILA ARSPVFMAEF FGGMNERSSQ TVRIEDMDDD
101: VFKAMLHFIY TDRAPELDEE PDVAVTMAQH LLVAADRYGL DRLKLICGSK LAGGISIDTV ATTLAVAEQH SCSLLKAKCV DFIARSPETL DAVLATEGYN
201: HLVESHPLVL TELLRAAHGR RI

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.