CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046968_P001	Maize	cytosol	82.92	82.69
OQU76847	Sorghum	cytosol	30.03	49.1
Os08t0198300-01	Rice	cytosol	44.9	45.53
EER98422	Sorghum	cytosol	44.63	44.75
EER90192	Sorghum	cytosol	41.05	43.7
EER90188	Sorghum	cytosol	43.8	43.09
KXG20568	Sorghum	cytosol	41.87	41.76
OQU76843	Sorghum	cytosol	32.51	37.7
OQU79162	Sorghum	cytosol, plastid	34.71	36.1
OQU76844	Sorghum	cytosol	37.19	36.0
OQU76846	Sorghum	cytosol	26.45	33.92
KXG19711	Sorghum	cytosol	26.72	32.44
GSMUA_Achr10P...	Banana	extracellular	4.96	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.2	12.7
GSMUA_Achr2P00070_001	Banana	extracellular	4.96	11.76
KRH48502	Soybean	cytosol	4.41	10.46
EES19490	Sorghum	nucleus	18.18	8.86
CDX70872	Canola	cytosol	6.06	5.68
Bra002227.1-P	Field mustard	cytosol	6.89	4.64

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A194YLV0	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	ProteinID:KXG20566.1	EnsemblPlants:KXG20567	ProteinID:KXG20567	ProteinID:KXG20567.1	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3010G222100	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0007F25FD8
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56449305..56451149

Molecular Weight (calculated)

39914.1 Da

IEP (calculated)

7.249

GRAVY (calculated)

-0.111

Length

363 amino acids

Sequence
(BLAST)

001: MGVSFSNLTD AACVVHQFKI NGYSATKSMA RTDSLPSKRL AVGGYEWEVH YTPSLVVDGG YWIAFRLVLL SAPRRNDVKA AFRCRLLYTS SNSLQQRGAC
101: VRDAIGNVEG QISHAFKRAK ESSGWIPLRK RNDVEAAGVI ENDSFTAECT ITVVTELPPE PDTAKTNVVR PPMPPLSGLH SLHHDLGELL SKATGSDVVL
201: VVSGETFAAH KAILASRSPV FMAQFFGPMK ETRSERVEIM DMEAAVFGAM LRFMYTDMVQ ELERQEDGAI IAQHLLAAAD RYGLDRLKSM CEDKLCDGTR
301: VETAATTLAL AEQHCCPKLK ARCVEFIAAN LDDVMATEGY KHLMTSSPLV LNDLLRAVRG RKN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.