Factsheet for Os08t0198300-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plasma membrane
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20567	Sorghum	cytosol	45.53	44.9
Zm00001d046968_P001	Maize	cytosol	44.69	43.96
Os06t0668400-01	Rice	cytosol	38.27	37.64
Os06t0251200-01	Rice	cytosol	35.75	36.36
Os06t0668300-00	Rice	cytosol	34.64	36.15
Os05t0398100-01	Rice	cytosol	17.04	27.23
GSMUA_Achr10P...	Banana	extracellular	5.03	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	1.96	11.11
GSMUA_Achr2P00070_001	Banana	extracellular	4.47	10.46
KRH48502	Soybean	cytosol	4.47	10.46
Bra002227.1-P	Field mustard	cytosol	8.38	5.57
CDX70872	Canola	cytosol	5.87	5.43

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A0P0XCU9	ProteinID:BAT04235.1
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
EnsemblPlantsGene:Os08g0198300	EnsemblPlants:Os08t0198300-01	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0000DD940B
SEG:seg	:	:	:	:	:

Description

Similar to speckle-type POZ protein. (Os08t0198300-01)

Coordinates

chr8:+:5681460..5683088

Molecular Weight (calculated)

38664.9 Da

IEP (calculated)

9.891

GRAVY (calculated)

-0.099

Length

358 amino acids

Sequence
(BLAST)

001: ARHRDPYIHG GVILVEPHRR RARRAHVQDQ WLLRHQSHGE DGLPPVQAPP RRRLPLGAPL HRQPHRRLQP LGRPQARPPR RADVKAALRC RLISNSATTS
101: AAVDGHVSHA FKRAGESSAW VLILRRSALE ASGAIVDDAF TVECTITVIT EIPDNVAAAA PAAPANVLPP FSGRGLSLSH HLGELLRRGT GADVTLVVSG
201: KCFPAHRAIL ASRSPVFMAS LFGDMKEKSS RSVEIRDIEP QVFGAMLGFI YTDSVPELDQ QDGVVVAQHL LAAADMCGLD GLKIMCEEKL IAGATVETAA
301: TTLALAEQHG CPRLKARCVE VVAANLDAVM ATEGYKHLMA SSPLVMNDLL RAVRGRKS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.