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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • cytosol 2
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
TargetP:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0251200-01 Rice cytosol 45.19 44.03
OQU76844 Sorghum cytosol 46.06 42.13
Os06t0668400-01 Rice cytosol 41.4 39.01
Os08t0198300-01 Rice cytosol 36.15 34.64
Os05t0398100-01 Rice cytosol 16.04 24.55
GSMUA_Achr10P... Banana extracellular 4.96 16.35
GSMUA_Achr2P00150_001 Banana cytosol, extracellular, plastid 2.62 14.29
GSMUA_Achr2P00070_001 Banana extracellular 5.25 11.76
KRH48502 Soybean cytosol 4.66 10.46
Bra002227.1-P Field mustard cytosol 9.33 5.94
CDX70872 Canola cytosol 5.83 5.17
Protein Annotations
Gene3D:1.25.40.420Gene3D:2.60.210.10Gene3D:3.30.710.10MapMan:35.1UniProt:A0A0P0X026ProteinID:BAS99055.1
InterPro:BPM_CInterPro:BTB/POZ_domGO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000210
InterPro:IPR002083InterPro:IPR008974InterPro:MATH/TRAF_domEnsemblPlantsGene:Os06g0668300EnsemblPlants:Os06t0668300-00PFAM:PF00651
PFscan:PS50097PANTHER:PTHR26379PANTHER:PTHR26379:SF220InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF49599
SUPFAM:SSF54695InterPro:TRAF-likeUniParc:UPI0003939EFDSEG:seg::
Description
BTB/POZ-like domain containing protein. (Os06t0668300-00)
Coordinates
chr6:-:27681408..27682517
Molecular Weight (calculated)
37638.0 Da
IEP (calculated)
4.806
GRAVY (calculated)
0.069
Length
343 amino acids
Sequence
(BLAST)
001: LLRINGYSAT ANRQNLVTSC TIAVGGYDWL IEVFPAAYYH GTSSRNSGPY IKLRFTLSSD GERTVSATFR CRLVDDHQIN QTAASASSSF KEVIVTSIFS
101: NGQPKDMFLV SRSYASEYRY VQPDDSLLIE CAITVLLEAP VNAAASVPAP LSDLQKHLGE MLTSKNGADI TFLVSGEPVA AHRCVLAARS PVFMAELFGD
201: MKEKDSQSIE IKDMEAEVFR TLLHFIYTDT LPEQDDDDVE AETMAYGLLE AADRYGVERL MLICAEKVHA GISVDTAAMA LALAERHGCT KLKARCIEFI
301: LASQENFHAV AATEGYKLLM DSCPSALNDL LVAVFLRYKL TVL
Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)
001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH
Arabidopsis Description
BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.