Factsheet for Os06t0251200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G376100.1	Wheat	cytosol	25.28	60.96
TraesCS7A01G474500.1	Wheat	cytosol	21.59	60.32
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	46.02	47.51
Os06t0668300-00	Rice	cytosol	44.03	45.19
Zm00001d036641_P001	Maize	cytosol	48.01	44.59
Os06t0668400-01	Rice	cytosol	46.02	44.51
Zm00001d036646_P002	Maize	cytosol	44.89	44.38
Zm00001d036643_P002	Maize	cytosol	45.74	44.35
TraesCS7D01G460000.1	Wheat	cytosol	38.92	40.41
Os08t0198300-01	Rice	cytosol	36.36	35.75
TraesCS7B01G379600.1	Wheat	cytosol	43.18	31.73
OQU76846	Sorghum	cytosol	25.28	31.45
Zm00001d036647_P001	Maize	plastid	28.98	30.0
HORVU7Hr1G094540.2	Barley	cytosol	43.47	28.44
Os05t0398100-01	Rice	cytosol	16.48	25.89
TraesCS7B01G375900.1	Wheat	cytosol	36.08	21.2
GSMUA_Achr10P...	Banana	extracellular	4.83	16.35
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.56	14.29
KRH48502	Soybean	cytosol	4.55	10.46
GSMUA_Achr2P00070_001	Banana	extracellular	4.26	9.8
Bra002227.1-P	Field mustard	cytosol	10.51	6.86
CDX70872	Canola	cytosol	5.68	5.17

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:4340657	EMBL:AK067034
ProteinID:BAD45981.1	ProteinID:BAF19210.1	ProteinID:BAS97061.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	ProteinID:EAZ36499.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	EnsemblPlantsGene:Os06g0251200	EnsemblPlants:Os06t0251200-01	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144
PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	UniProt:Q653N6	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000043A471	RefSeq:XP_015641081.1	RefSeq:XP_015641082.1	:

Description

Kelch related domain containing protein. (Os06t0251200-01)

Coordinates

chr6:-:7841699..7844795

Molecular Weight (calculated)

39026.9 Da

IEP (calculated)

5.765

GRAVY (calculated)

0.027

Length

352 amino acids

Sequence
(BLAST)

001: METPTNLTNT ISAVHLLKIN GYSVTRALGC SEYISSRRLA AGGYDWEVLY YPRYYEHGVY WIALRLMFMS KECKHEVKAA LKCQLVHEAQ IYLPSGSKSV
101: SSKYTGQRDC GPALLLVKQD DLPGSNYFIG DSFVVECTIT VLREPQEAVT NVSPNVSNPC CDLQMHLGEL LLSEKGADVT FVVAGESFLA HKIILAARSP
201: VFMAEFFGPM KESSSQCVEI KDIEASVFKA MLHFIYTGTS PELDQQHVVS DSEQDITTMT QHLLVAADRY GLDRLKLICQ DRLHDDINVE TVATTLAFAE
301: QHSCTQLKDR CIEFIISSRA NLDAVMATEG YKLVIASCPS VLSTLLRAAV GR

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.