Factsheet for Zm00001d036641_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036643_P002	Maize	cytosol	72.03	75.21
Zm00001d036646_P002	Maize	cytosol	67.81	72.19
KXG20568	Sorghum	cytosol	66.49	69.23
TraesCS7B01G375800.1	Wheat	cytosol	15.57	61.46
TraesCS7A01G474500.1	Wheat	cytosol	20.05	60.32
TraesCS7B01G376100.1	Wheat	cytosol	22.69	58.9
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	45.65	50.73
Os06t0251200-01	Rice	cytosol	44.59	48.01
Zm00001d019441_P001	Maize	cytosol	42.74	46.29
Zm00001d019513_P001	Maize	cytosol	42.48	45.87
Zm00001d036647_P001	Maize	plastid	40.37	45.0
TraesCS7D01G460000.1	Wheat	cytosol	39.58	44.25
Zm00001d023740_P001	Maize	cytosol	40.37	41.58
Zm00001d046968_P001	Maize	cytosol	39.31	40.93
TraesCS7B01G379600.1	Wheat	cytosol	38.26	30.27
Zm00001d012798_P001	Maize	cytosol	22.43	29.72
HORVU7Hr1G094540.2	Barley	cytosol	39.58	27.88
TraesCS7B01G375900.1	Wheat	cytosol	38.26	24.21
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.9	17.46
GSMUA_Achr10P...	Banana	extracellular	4.49	16.35
KRH48502	Soybean	cytosol	6.07	15.03
GSMUA_Achr2P00070_001	Banana	extracellular	4.75	11.76
Zm00001d038134_P001	Maize	cytosol	19.26	9.18
Zm00001d010341_P002	Maize	cytosol	16.89	8.34
CDX70872	Canola	cytosol	7.12	6.98
Bra002227.1-P	Field mustard	cytosol	9.5	6.68

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	ProteinID:AQK81597.1	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	UniProt:K7UEP7	EMBL:KJ728241	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097
PANTHER:PTHR26379	PANTHER:PTHR26379:SF180	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI000220C614	EnsemblPlantsGene:Zm00001d036641	EnsemblPlants:Zm00001d036641_P001	EnsemblPlants:Zm00001d036641_T001	SEG:seg

Description

math-btb23Speckle-type POZ protein

Coordinates

chr6:+:95981467..95983819

Molecular Weight (calculated)

41850.5 Da

IEP (calculated)

4.651

GRAVY (calculated)

-0.141

Length

379 amino acids

Sequence
(BLAST)

001: MEHDGTTNLA VTEAVRSVQL LKIDGYCATA TMGASEFIKF RWHIDGHEWE VRFYPDYWYF FEDEDCFGTY GDDDHSEWVG LKLILVSEPQ RDDDKVRVNL
101: SCRLVCPSPT SQRPHLDTCW SEEKRVSHVF ASDSKCSPEL LLILKHELPS SGYLVDDSLT VECTVTVLRD LDAATDKALS SLPVPPPSDL HQHLGDLLQS
201: EDGADVTFRV SGESFAAHRA ILAARSPVFK AEFFGGMEER SSASVEVKGM EAAVFRSMLR FIYTDTAPEL DGAQDQEPEA AVAMAQHLLV AADRYGLNRL
301: KLMCECKLSG GIDIGTAAAT LALAEQHNCS LLKAKCLEFV TRSPETLDAI LATDGYEHLV ASCPSVLAEL LRAARGRKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.