Factsheet for Zm00001d023740_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G375000.1	Wheat	cytosol	27.72	57.95
TraesCS7A01G471800.1	Wheat	cytosol	19.57	57.14
HORVU7Hr1G108200.1	Barley	cytosol	20.38	56.82
TraesCS7A01G471200.1	Wheat	cytosol	21.74	55.17
TraesCS7D01G459300.1	Wheat	cytosol	21.2	53.42
TraesCS7A01G471900.1	Wheat	cytosol	19.57	51.8
TraesCS7B01G373800.1	Wheat	cytosol	30.16	48.68
HORVU7Hr1G107980.3	Barley	cytosol, plastid	32.61	46.33
TraesCS7A01G472400.1	Wheat	cytosol	40.76	46.3
TraesCS7A01G472800.1	Wheat	cytosol	42.12	44.29
TraesCS7D01G458600.1	Wheat	cytosol, plastid	41.58	43.59
TraesCS7B01G373200.1	Wheat	cytosol, plastid	41.58	43.59
Zm00001d036646_P002	Maize	cytosol	42.12	43.54
TraesCS7A01G401800.1	Wheat	cytosol	41.58	42.98
HORVU7Hr1G108090.1	Barley	cytosol	41.58	42.74
TraesCS7D01G459200.1	Wheat	cytosol	38.86	42.69
TraesCS7B01G375700.1	Wheat	cytosol	40.22	42.65
TraesCS7D01G459700.1	Wheat	cytosol	43.21	42.63
TraesCS7D01G459400.1	Wheat	cytosol	17.12	42.57
TraesCS7B01G373600.1	Wheat	cytosol	35.87	42.44
TraesCS7D01G459500.1	Wheat	cytosol	40.22	42.29
TraesCS7B01G374200.1	Wheat	cytosol	39.4	41.79
TraesCS7B01G374000.1	Wheat	cytosol	38.59	41.64
TraesCS7A01G473500.1	Wheat	cytosol	39.95	41.53
TraesCS7A01G473100.1	Wheat	cytosol	42.12	41.33
HORVU7Hr1G108000.1	Barley	cytosol	41.85	41.29
HORVU7Hr1G107780.4	Barley	cytosol	41.3	41.19
TraesCS7A01G472500.1	Wheat	cytosol	42.12	41.11
Zm00001d036643_P002	Maize	cytosol	40.22	40.77
TraesCS7D01G395400.1	Wheat	cytosol	38.32	40.75
TraesCS7A01G472200.1	Wheat	cytosol	40.49	40.6
TraesCS7B01G373700.1	Wheat	cytosol	40.22	40.55
TraesCS7A01G474300.1	Wheat	cytosol	38.32	40.52
Zm00001d036641_P001	Maize	cytosol	41.58	40.37
TraesCS7A01G471400.1	Wheat	cytosol	39.4	40.06
TraesCS7B01G373900.2	Wheat	cytosol	41.03	39.95
TraesCS7D01G459600.1	Wheat	cytosol	36.96	39.77
Zm00001d019513_P001	Maize	cytosol	37.77	39.6
Zm00001d019441_P001	Maize	cytosol	37.23	39.14
TraesCS4A01G432700.1	Wheat	cytosol	34.24	38.53
TraesCSU01G063900.1	Wheat	cytosol	34.24	38.53
TraesCS7A01G472300.1	Wheat	cytosol, mitochondrion	37.23	38.27
Zm00001d046968_P001	Maize	cytosol	37.23	37.64
TraesCS7A01G057100.1	Wheat	cytosol	35.05	36.34
TraesCS7D01G459800.1	Wheat	cytosol	21.2	30.0
Zm00001d036647_P001	Maize	plastid	24.46	26.47
Zm00001d012798_P001	Maize	cytosol	14.67	18.88
GSMUA_Achr10P...	Banana	extracellular	4.89	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.72	15.87
KRH48502	Soybean	cytosol	5.16	12.42
GSMUA_Achr2P00070_001	Banana	extracellular	4.35	10.46
Zm00001d038134_P001	Maize	cytosol	17.39	8.05
Zm00001d010341_P002	Maize	cytosol	16.3	7.82
CDX70872	Canola	cytosol	5.98	5.68
Bra002227.1-P	Field mustard	cytosol	7.07	4.82

Protein Annotations

EnsemblPlants:Zm00001d023740_P001	EnsemblPlants:Zm00001d023740_T001	EnsemblPlantsGene:Zm00001d023740	Gene3D:1.25.40.420	Gene3D:3.30.710.10	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:BPM_C	InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf
PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	PFAM:PF00651	PFscan:PS50097	ProteinID:AQK39937.1	SEG:seg
SMART:SM00225	SUPFAM:SSF54695	UniParc:UPI0002209637	UniProt:K7TN92	MapMan:35.1	:

Description

math-btb22BTB/POZ and MATH domain-containing protein 2

Coordinates

chr10:-:18189171..18190277

Molecular Weight (calculated)

40384.5 Da

IEP (calculated)

6.734

GRAVY (calculated)

-0.052

Length

368 amino acids

Sequence
(BLAST)

001: MTHTCTHLIA NVCSVHRLKV DDFCVTKSTI RNKKDCCIRS RCSVDGYDWE IQFRFSPYEG SPEDYWLALV LVYLGAPCDG GVAVALSCHL VDQSCDLRVP
101: LLTTTQGLNT TFRRPLDRSP PIYFGKGKVR DDVQAAAAAG RPLIFKGGSF TVECQIDVHS SRDSDSVSLP SSDLHQHLGE LLRNQSGADV TFIVSGESIA
201: AHKSILAARS PIFMAQFFGN MLERGSQCVE IQDMHPAVFK AMLHYIYTDT VPDLGTDTTT VEETAVMAQH LLVAADMYAL DRLKEICEER LTRGIGIGTV
301: ASTLALADQH NLAQLKAKCI DFITGGSSKN LLAVLETEGY RHLEASNPSV LTELVMAAHG KKRKRLYG

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.