Factsheet for Zm00001d046968_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG20567	Sorghum	cytosol	82.69	82.92
Zm00001d019513_P001	Maize	cytosol	44.51	46.15
Os08t0198300-01	Rice	cytosol	43.96	44.69
Zm00001d019441_P001	Maize	cytosol	42.58	44.29
Zm00001d036646_P002	Maize	cytosol	41.48	42.42
Zm00001d036641_P001	Maize	cytosol	40.93	39.31
Zm00001d036643_P002	Maize	cytosol	39.01	39.12
Zm00001d023740_P001	Maize	cytosol	37.64	37.23
Zm00001d036647_P001	Maize	plastid	24.45	26.18
GSMUA_Achr10P...	Banana	extracellular	5.77	20.19
Zm00001d012798_P001	Maize	cytosol	14.56	18.53
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	1.92	11.11
KRH48502	Soybean	cytosol	4.67	11.11
GSMUA_Achr2P00070_001	Banana	extracellular	4.4	10.46
Zm00001d038134_P001	Maize	cytosol	17.58	8.05
Zm00001d010341_P002	Maize	cytosol	16.21	7.69
CDX70872	Canola	cytosol	6.32	5.94
Bra002227.1-P	Field mustard	cytosol	7.14	4.82

Protein Annotations

Gene3D:1.25.40.420	EntrezGene:100281374	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	ProteinID:AQL05269.1
UniProt:B4FKJ5	InterPro:BPM_C	EMBL:BT037633	EMBL:BT087452	InterPro:BTB/POZ_dom	EMBL:EU956499
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI00017B743B	EnsemblPlantsGene:Zm00001d046968
EnsemblPlants:Zm00001d046968_P001	EnsemblPlants:Zm00001d046968_T001	SEG:seg	:	:	:

Description

math-btb20BTB/POZ and MATH domain-containing protein 2

Coordinates

chr9:-:113501318..113502412

Molecular Weight (calculated)

39794.1 Da

IEP (calculated)

7.774

GRAVY (calculated)

-0.076

Length

364 amino acids

Sequence
(BLAST)

001: MGSSLSNLTD AACIVHQFKI NGYSATKSMA RTDSLPSKRL AVGGYEWEVH YTPSLLVDGS YMIAFRLVLL GAPRRNDVKA AFRCRLLYPS TNYGHQRGAC
101: VSDSMGNVEG QMSHAFKRAK ESSGWIPLRK RNVVEAARVI ENDSLTAECT ITVVTELPEP DTAKTNAVLP RIRRLTGVHS LHHDLGELLG KGTGSDVVLV
201: VCGESFAAHK AILASRSPVF MAQFFGPMKE THSQSQRVEI MDMEAAVFGA MLRFMYTDVV PELERQENGD VIAQHLLAAA DRYGLDKLKS MCEDKLCGGT
301: TVETAATTLA LAEQHGCPKL KAWCVEFIAA NLDAVMVTEG YKHLMTSSPL VLNDLLRAVR GTKN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.