Factsheet for Zm00001d012798_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036643_P002	Maize	cytosol	29.37	23.14
Zm00001d036646_P002	Maize	cytosol	27.97	22.47
Zm00001d036641_P001	Maize	cytosol	29.72	22.43
Zm00001d036647_P001	Maize	plastid	23.78	20.0
Zm00001d019513_P001	Maize	cytosol	24.13	19.66
Zm00001d019441_P001	Maize	cytosol	23.43	19.14
Zm00001d023740_P001	Maize	cytosol	18.88	14.67
Zm00001d046968_P001	Maize	cytosol	18.53	14.56
KRH48502	Soybean	cytosol	5.94	11.11
GSMUA_Achr2P00070_001	Banana	extracellular	4.2	7.84
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	1.4	6.35
Zm00001d038134_P001	Maize	cytosol	16.08	5.79
Zm00001d010341_P002	Maize	cytosol	14.34	5.35
CDX70872	Canola	cytosol	5.24	3.88
GSMUA_Achr10P...	Banana	extracellular	1.4	3.85
Bra002227.1-P	Field mustard	cytosol	6.64	3.53

Protein Annotations

Gene3D:1.20.1270.10	Gene3D:3.30.710.10	MapMan:35.2	UniProt:A0A1D6GCK7	ProteinID:AQK61401.1	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:HSP70_C_sf	InterPro:IPR000210	InterPro:IPR008974
InterPro:IPR029048	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI000843DFA1	EnsemblPlantsGene:Zm00001d012798
EnsemblPlants:Zm00001d012798_P001	EnsemblPlants:Zm00001d012798_T001	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr5:-:66614..69977

Molecular Weight (calculated)

31615.4 Da

IEP (calculated)

6.369

GRAVY (calculated)

-0.342

Length

286 amino acids

Sequence
(BLAST)

001: MVQEAETYKA EDEEHKKKVD AKNSLENYAY NMRNTRYACA CACACGSRLR KLQSSGYLVN DSLTVECTIT VLRDLDAPDR EQPLPVPPPS DLHQHLGELL
101: QSSDGADVTF HVSEESFTTH KIFLAARSPV FKVEFFGGMK EALLLWRSET WRLLCSGSCF TSSIPTWPQS SMGAAPSSAT TLGPTPAPRR APAEQRWSGR
201: HVSCLRGVLH HPQDLPHRKV LGLQGRVLQR HEGSSASVEI GDMEAVVFRA MLHFIYTDMA PELDGDQEPE AAAAAIAKHL LVATDW

Best Arabidopsis Sequence Match ( AT5G19000.1 )
(BLAST)

001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH

Arabidopsis Description

BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.