Subcellular Localization
min:
: max
Winner_takes_all: extracellular, cytosol, plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 1
- plasma membrane 2
- endoplasmic reticulum 1
- vacuole 1
- cytosol 1
- nucleus 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 52.38 | 39.76 |
| GSMUA_Achr2P00070_001 | Banana | extracellular | 80.95 | 33.33 |
| GSMUA_Achr10P... | Banana | extracellular | 30.16 | 18.27 |
| TraesCS7B01G375800.1 | Wheat | cytosol | 11.11 | 7.29 |
| CDX70872 | Canola | cytosol | 34.92 | 5.68 |
| TraesCS7A01G474500.1 | Wheat | cytosol | 9.52 | 4.76 |
| TraesCS7A01G471800.1 | Wheat | cytosol | 9.52 | 4.76 |
| HORVU7Hr1G108200.1 | Barley | cytosol | 9.52 | 4.55 |
| TraesCS7A01G471900.1 | Wheat | cytosol | 9.52 | 4.32 |
| TraesCS7A01G471200.1 | Wheat | cytosol | 9.52 | 4.14 |
| TraesCS7D01G459300.1 | Wheat | cytosol | 9.52 | 4.11 |
| TraesCS7D01G459400.1 | Wheat | cytosol | 9.52 | 4.05 |
| TraesCS7D01G461100.1 | Wheat | cytosol | 9.52 | 4.05 |
| GSMUA_Achr10P... | Banana | cytosol | 11.11 | 4.05 |
| TraesCS7A01G472000.1 | Wheat | cytosol | 9.52 | 4.03 |
| HORVU7Hr1G107980.3 | Barley | cytosol, plastid | 15.87 | 3.86 |
| TraesCS7A01G472200.1 | Wheat | cytosol | 22.22 | 3.81 |
| KXG19711 | Sorghum | cytosol | 17.46 | 3.68 |
| GSMUA_Achr9P17600_001 | Banana | cytosol | 42.86 | 3.63 |
| TraesCS7B01G373700.1 | Wheat | cytosol | 20.63 | 3.56 |
| OQU79162 | Sorghum | cytosol, plastid | 19.05 | 3.44 |
| Zm00001d019441_P001 | Maize | cytosol | 19.05 | 3.43 |
| TraesCS7B01G376100.1 | Wheat | cytosol | 7.94 | 3.42 |
| TraesCS7B01G375000.1 | Wheat | cytosol | 9.52 | 3.41 |
| TraesCS7B01G375500.1 | Wheat | extracellular, vacuole | 15.87 | 3.4 |
| EER98422 | Sorghum | cytosol | 19.05 | 3.31 |
| Zm00001d036643_P002 | Maize | cytosol | 19.05 | 3.31 |
| GSMUA_Achr2P00160_001 | Banana | cytosol, extracellular | 12.7 | 3.23 |
| OQU76843 | Sorghum | cytosol | 15.87 | 3.19 |
| Zm00001d019513_P001 | Maize | cytosol | 17.46 | 3.13 |
| Zm00001d036646_P002 | Maize | cytosol | 17.46 | 3.09 |
| TraesCS7A01G471400.1 | Wheat | cytosol | 17.46 | 3.04 |
| KXG20568 | Sorghum | cytosol | 17.46 | 3.02 |
| GSMUA_Achr10P... | Banana | cytosol | 9.52 | 3.0 |
| EER90188 | Sorghum | cytosol | 17.46 | 2.98 |
| TraesCS7D01G459700.1 | Wheat | cytosol | 17.46 | 2.95 |
| HORVU7Hr1G108000.1 | Barley | cytosol | 17.46 | 2.95 |
| Zm00001d036641_P001 | Maize | cytosol | 17.46 | 2.9 |
| TraesCS7B01G373600.1 | Wheat | cytosol | 14.29 | 2.89 |
| TraesCS7D01G395400.1 | Wheat | cytosol | 15.87 | 2.89 |
| TraesCS7B01G375700.1 | Wheat | cytosol | 15.87 | 2.88 |
| TraesCS7B01G374200.1 | Wheat | cytosol | 15.87 | 2.88 |
| TraesCS7D01G459500.1 | Wheat | cytosol | 15.87 | 2.86 |
| TraesCS7A01G472800.1 | Wheat | cytosol | 15.87 | 2.86 |
| TraesCS7A01G473500.1 | Wheat | cytosol | 15.87 | 2.82 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 17.46 | 2.82 |
| TraesCS7A01G401800.1 | Wheat | cytosol | 15.87 | 2.81 |
| TraesCS7A01G472300.1 | Wheat | cytosol, mitochondrion | 15.87 | 2.79 |
| TraesCS7A01G472400.1 | Wheat | cytosol | 14.29 | 2.78 |
| Zm00001d023740_P001 | Maize | cytosol | 15.87 | 2.72 |
| OQU76847 | Sorghum | cytosol | 9.52 | 2.7 |
| GSMUA_Achr2P00100_001 | Banana | cytosol | 7.94 | 2.69 |
| TraesCS7D01G459200.1 | Wheat | cytosol | 14.29 | 2.69 |
| TraesCS7D01G460000.1 | Wheat | cytosol | 14.29 | 2.65 |
| TraesCS7A01G472500.1 | Wheat | cytosol | 15.87 | 2.65 |
| EER90192 | Sorghum | cytosol | 14.29 | 2.64 |
| TraesCS7B01G374000.1 | Wheat | cytosol | 14.29 | 2.64 |
| TraesCS7B01G373800.1 | Wheat | cytosol | 9.52 | 2.63 |
| Os06t0668300-00 | Rice | cytosol | 14.29 | 2.62 |
| TraesCS7A01G474300.1 | Wheat | cytosol | 14.29 | 2.59 |
| Os06t0251200-01 | Rice | cytosol | 14.29 | 2.56 |
| TraesCS7A01G057100.1 | Wheat | cytosol | 14.29 | 2.54 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 17.46 | 2.53 |
| HORVU7Hr1G108090.1 | Barley | cytosol | 14.29 | 2.51 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 7.94 | 2.48 |
| Os06t0668400-01 | Rice | cytosol | 14.29 | 2.47 |
| TraesCSU01G063900.1 | Wheat | cytosol | 12.7 | 2.45 |
| TraesCS4A01G432700.1 | Wheat | cytosol | 12.7 | 2.45 |
| TraesCS7D01G461300.1 | Wheat | cytosol, mitochondrion | 12.7 | 2.35 |
| TraesCS7D01G459600.1 | Wheat | cytosol | 12.7 | 2.34 |
| TraesCS7D01G460100.1 | Wheat | cytosol | 12.7 | 2.32 |
| TraesCS7D01G459800.1 | Wheat | cytosol | 9.52 | 2.31 |
| TraesCS7B01G373200.1 | Wheat | cytosol, plastid | 12.7 | 2.28 |
| TraesCS7D01G458600.1 | Wheat | cytosol, plastid | 12.7 | 2.28 |
| KXG20567 | Sorghum | cytosol | 12.7 | 2.2 |
| HORVU7Hr1G107780.4 | Barley | cytosol | 12.7 | 2.17 |
| TraesCS7B01G373900.2 | Wheat | cytosol | 12.7 | 2.12 |
| Os08t0198300-01 | Rice | cytosol | 11.11 | 1.96 |
| Zm00001d046968_P001 | Maize | cytosol | 11.11 | 1.92 |
| OQU76844 | Sorghum | cytosol | 11.11 | 1.87 |
| TraesCS7A01G473100.1 | Wheat | cytosol | 11.11 | 1.87 |
| HORVU7Hr1G094540.2 | Barley | cytosol | 15.87 | 1.86 |
| TraesCS7B01G379600.1 | Wheat | cytosol | 12.7 | 1.67 |
| Zm00001d012798_P001 | Maize | cytosol | 6.35 | 1.4 |
| KRH48502 | Soybean | cytosol | 3.17 | 1.31 |
| TraesCS7A01G474100.1 | Wheat | cytosol | 6.35 | 1.28 |
| TraesCS7A01G472700.1 | Wheat | plastid | 3.17 | 1.08 |
| GSMUA_Achr2P00090_001 | Banana | cytosol | 3.17 | 1.07 |
| OQU76846 | Sorghum | cytosol | 3.17 | 0.71 |
| GSMUA_Achr2P00050_001 | Banana | extracellular, plasma membrane | 1.59 | 0.69 |
| TraesCS7B01G375900.1 | Wheat | cytosol | 6.35 | 0.67 |
| Zm00001d036647_P001 | Maize | plastid | 3.17 | 0.59 |
| Bra002227.1-P | Field mustard | cytosol | 1.59 | 0.19 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, plastid | 0.0 | 0.0 |
| GSMUA_Achr10P... | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P00150_001 | EnsemblPlants:GSMUA_Achr2T00150_001 | EnsemblPlantsGene:GSMUA_Achr2G00150_001 | GO:GO:0003674 | GO:GO:0005488 | InterPro:ARM-type_fold |
| SUPFAM:SSF48371 | UniParc:UPI000295AFD2 | UniProt:M0S3V6 | MapMan:35.1 | : | : |
Description
ABTB1 - Armadillo repeats with a Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G00150_001]
Coordinates
chr2:-:333572..333885
Molecular Weight (calculated)
6775.4 Da
IEP (calculated)
5.620
GRAVY (calculated)
0.560
Length
63 amino acids
Sequence
(BLAST)
(BLAST)
1: MVNCHSCCTE SQREAALLLG QFASADSDCK ALCAVRPLIG MLQSPDIQLK AMFVFALGIP FNV
001: MRVLDEIAES PFLISPLNPN STANGYRWVD KCHGFLHNTV LVAASLFFVA YLAYEAKKSL SKLSNRRSYI MIAYYGCLWL VSLLNLAWCC LQGWECTPGK
101: EVVWNLLTLF TTSGMLFLEV SLVAFLFQGN YASGAEALTR TFLISGFIVA LDLLLKAIFL FGFGVPLFID NNENGKTFKW GLWIIHKLLL TGVYGMVFLM
201: YNSRWREKLP ARPAFYNYII IMFALYSLYL VASAFTANNA HFGFWLYGIM SVCYHALYLP LLYITFLADF FQEEDLNLEN VYYSEMKDAG FFDSDWE
101: EVVWNLLTLF TTSGMLFLEV SLVAFLFQGN YASGAEALTR TFLISGFIVA LDLLLKAIFL FGFGVPLFID NNENGKTFKW GLWIIHKLLL TGVYGMVFLM
201: YNSRWREKLP ARPAFYNYII IMFALYSLYL VASAFTANNA HFGFWLYGIM SVCYHALYLP LLYITFLADF FQEEDLNLEN VYYSEMKDAG FFDSDWE
Arabidopsis Description
Protein of unknown function, transmembrane-40 [Source:TAIR;Acc:AT5G27210]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.