Factsheet for TraesCS7B01G373900.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G472400.1	Wheat	cytosol	76.98	89.81
TraesCS7D01G459600.1	Wheat	cytosol	74.6	82.46
TraesCS7B01G373600.1	Wheat	cytosol	58.99	71.7
TraesCS7B01G375000.1	Wheat	cytosol	33.07	71.02
TraesCS7B01G376100.1	Wheat	cytosol	26.72	69.18
TraesCS7B01G374000.1	Wheat	cytosol	61.38	68.04
TraesCS7B01G375800.1	Wheat	cytosol	16.93	66.67
TraesCS7B01G375700.1	Wheat	cytosol	53.44	58.21
TraesCS7B01G373200.1	Wheat	cytosol, plastid	52.38	56.41
TraesCS7B01G373800.1	Wheat	cytosol	33.6	55.7
TraesCS7B01G373700.1	Wheat	cytosol	48.15	49.86
TraesCS7B01G374200.1	Wheat	cytosol	45.77	49.86
EER90188	Sorghum	cytosol	44.71	45.8
TraesCS7B01G375500.1	Wheat	extracellular, vacuole	34.66	44.56
Zm00001d023740_P001	Maize	cytosol	39.95	41.03
TraesCS7B01G379600.1	Wheat	cytosol	40.48	31.94
TraesCS7B01G375900.1	Wheat	cytosol	34.92	22.04
GSMUA_Achr10P...	Banana	extracellular	5.29	19.23
KRH48502	Soybean	cytosol	5.56	13.73
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.12	12.7
GSMUA_Achr2P00070_001	Banana	extracellular	5.03	12.42
TraesCS1B01G260100.1	Wheat	cytosol	20.11	10.24
CDX70872	Canola	cytosol	6.61	6.46
Bra002227.1-P	Field mustard	cytosol	7.94	5.57

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7B01G373900	EnsemblPlants:TraesCS7B01G373900.2
TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:-:639380987..639383232

Molecular Weight (calculated)

41932.2 Da

IEP (calculated)

6.283

GRAVY (calculated)

0.191

Length

378 amino acids

Sequence
(BLAST)

001: MENACTSLNQ VARSVRLLKI DGFSLTAGMG GDYCLKSIWT VDGYELEVLI YPGTTWVALK LVFLSEARTQ WGVRANMACQ LVDLSRELEP YHEYGVSETF
101: YHPQHFGALV FMDRNKIPSG YIKDDMLTLR CTITVLKELP APTIPAEEVI AQPSTNLHRH LGELLQSEMG ADVTFLVCDE SFAAHKCIPA ARSPVFKAQF
201: FGDMKETCSA RVEIKDMEVA AFRAMLHFIY TDTMPEFDRP LEEVTTMAQH LLVAADMYGL ERLKLICEIK LSIGITVDTA ATTLALAEQH NCSKLKAKCV
301: GFIVSTPAIL EAVLATDGYK HLETSCPLIL TELLKSVHCV QGLARTFFPV LLRLKSSFSI KGKFSVCFDA LSRLGPLG

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.