Factsheet for TraesCS7B01G374200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G459300.1	Wheat	cytosol	36.6	86.99
TraesCS7A01G471900.1	Wheat	cytosol	32.85	82.01
TraesCS7B01G375800.1	Wheat	cytosol	19.88	71.88
TraesCS7B01G373700.1	Wheat	cytosol	70.61	67.12
TraesCS7B01G375000.1	Wheat	cytosol	33.43	65.91
TraesCS7B01G376100.1	Wheat	cytosol	26.22	62.33
TraesCS7B01G373800.1	Wheat	cytosol	37.75	57.46
TraesCS7B01G373200.1	Wheat	cytosol, plastid	52.74	52.14
TraesCS7B01G375700.1	Wheat	cytosol	51.01	51.01
TraesCS7B01G374000.1	Wheat	cytosol	46.4	47.21
TraesCS7B01G373900.2	Wheat	cytosol	49.86	45.77
TraesCS7B01G373600.1	Wheat	cytosol	40.35	45.02
TraesCS7B01G375500.1	Wheat	extracellular, vacuole	36.6	43.2
Zm00001d023740_P001	Maize	cytosol	41.79	39.4
TraesCS7B01G379600.1	Wheat	cytosol	38.04	27.56
TraesCS7B01G375900.1	Wheat	cytosol	33.72	19.53
GSMUA_Achr10P...	Banana	extracellular	5.19	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.88	15.87
TraesCS1B01G260100.1	Wheat	cytosol	21.33	9.97
KRH48502	Soybean	cytosol	4.32	9.8
GSMUA_Achr2P00070_001	Banana	extracellular	4.32	9.8
CDX70872	Canola	cytosol	5.48	4.91
Bra002227.1-P	Field mustard	cytosol	7.49	4.82

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF180	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7B01G374200	EnsemblPlants:TraesCS7B01G374200.1
TIGR:cd00121	TIGR:cd14736	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:639514256..639515645

Molecular Weight (calculated)

37989.0 Da

IEP (calculated)

5.662

GRAVY (calculated)

0.087

Length

347 amino acids

Sequence
(BLAST)

001: MENACEDITN VVRSVKLLRI DGYCTTETMG HGDCIRSSLN VGGYEWEICI YPAMRDTDGT RANLSCCLVD LTGARVPLGG SVSWIFNRPW TFCYLVKCSP
101: VARENISPPV RLISTGKLPL SGFLLNDSFT VECTITVFKE DLPAPATTPG KQVSGSGSSP SLQDHLAELL RSGMEADVTF LVSGKSFAAH KLILAARSPV
201: LMAEFFGDMK ETSSRCVEIK DMKAEVFEPL LYFIYTDSVL EFSLQHERVT MLAQHLLAAA DRYGLDRLKQ ICEGKLSDGI SVDTAAITLA LAEQHYCPQL
301: KVKCVDFIVS TPAILDAVLA TDGYKHLEAS CPMVLPELLK SARGRKN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.