Factsheet for TraesCS7B01G375900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	27.71	48.68
TraesCS7B01G375700.1	Wheat	cytosol	23.71	40.92
TraesCS7B01G376100.1	Wheat	cytosol	9.68	39.73
TraesCS7B01G373600.1	Wheat	cytosol	20.37	39.23
TraesCS7B01G373200.1	Wheat	cytosol, plastid	22.7	38.75
Zm00001d036641_P001	Maize	cytosol	24.21	38.26
TraesCS7B01G373800.1	Wheat	cytosol	14.52	38.16
Zm00001d036646_P002	Maize	cytosol	22.04	37.08
Zm00001d036643_P002	Maize	cytosol	22.37	36.91
TraesCS7B01G375000.1	Wheat	cytosol	10.68	36.36
Os06t0251200-01	Rice	cytosol	21.2	36.08
TraesCS7B01G373700.1	Wheat	cytosol	21.7	35.62
TraesCS7B01G373900.2	Wheat	cytosol	22.04	34.92
TraesCS7B01G374000.1	Wheat	cytosol	19.87	34.9
TraesCS7B01G374200.1	Wheat	cytosol	19.53	33.72
TraesCS7B01G375500.1	Wheat	extracellular, vacuole	16.19	32.99
Zm00001d036647_P001	Maize	plastid	17.36	30.59
TraesCS7B01G379600.1	Wheat	cytosol	24.21	30.27
TraesCS7B01G375800.1	Wheat	cytosol	3.67	22.92
GSMUA_Achr10P...	Banana	extracellular	2.34	13.46
KRH48502	Soybean	cytosol	2.5	9.8
TraesCS1B01G260100.1	Wheat	cytosol	10.68	8.63
GSMUA_Achr2P00070_001	Banana	extracellular	1.67	6.54
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	0.67	6.35
Bra002227.1-P	Field mustard	cytosol	4.67	5.19
CDX70872	Canola	cytosol	2.67	4.13

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599
SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7B01G375900	EnsemblPlants:TraesCS7B01G375900.1	TIGR:cd00121	SEG:seg

Description

No Description!

Coordinates

chr7B:-:641091292..641096743

Molecular Weight (calculated)

66283.2 Da

IEP (calculated)

7.804

GRAVY (calculated)

0.099

Length

599 amino acids

Sequence
(BLAST)

001: MANTCTNFTD TVRFVRLFKI DGFDMMSSTL RDNECITSRW CINGYEWEIH CYPPRWACDW VAVKLMLVSE AGTVAVRANL SCLLVHPVMQ GGVSQFEKSV
101: SHVFKSHKDC SNRVKLVQKS SIPAPAHPKD DYLIVQCTIT VLKERTDVAA AVPVPASNLP QHFGDLLQRG TGADITFVVS GESFAAHKVI LAARSPVLMA
201: EFFGYMREAS AQSIMIKDME AAVFKAMLHF IYTDTVPELD RELEAVETMA QHLLVAADRR LIGKVNAKIV GYFALIDHFG VVSSTSNAHA CRRLHPRSHH
301: LAGFNCRPCC TNCPAPPSVH HLLTPNLHFL SVCTPSSPAC AMVANTCTNL TDTARFERLF KIDGFSLVSS TLGSTELIKS NAIHVDGYEW EIHCFPRAWY
401: SNWYVALKLM FLSDAPRTGA VTASLSCLLV HPRMVGNAPH SEKNLAHVFR RHKDCSNTVL LVQRDSLMQP ACPRDDYLTV RCTSTVLKEP PAVATTVPVP
501: TANLHKHLSE LLCRGTGADV TFSVGSEKFA AHNAILAARS PVLMAEFFGQ TREATSPCVV IEDMEVAAFK AMLCFDFRFE LFFALSRDGR ISAIFKNFG

Best Arabidopsis Sequence Match ( AT3G06190.5 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKGTED HSLLV

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.