Factsheet for TraesCS7B01G375700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G108200.1	Barley	cytosol	33.43	87.88
TraesCS7B01G375800.1	Wheat	cytosol	22.77	82.29
TraesCS7B01G376100.1	Wheat	cytosol	30.26	71.92
TraesCS7B01G375000.1	Wheat	cytosol	32.56	64.2
TraesCS7A01G474300.1	Wheat	cytosol	58.5	58.33
TraesCS7B01G373800.1	Wheat	cytosol	38.33	58.33
TraesCS7B01G373600.1	Wheat	cytosol	51.01	56.91
TraesCS7B01G373200.1	Wheat	cytosol, plastid	55.04	54.42
TraesCS7B01G374000.1	Wheat	cytosol	53.03	53.96
TraesCS7B01G373900.2	Wheat	cytosol	58.21	53.44
TraesCS7B01G374200.1	Wheat	cytosol	51.01	51.01
TraesCS7B01G373700.1	Wheat	cytosol	53.6	50.96
TraesCS7B01G375500.1	Wheat	extracellular, vacuole	40.06	47.28
Zm00001d023740_P001	Maize	cytosol	42.65	40.22
TraesCS7B01G379600.1	Wheat	cytosol	45.82	33.19
TraesCS7B01G375900.1	Wheat	cytosol	40.92	23.71
GSMUA_Achr10P...	Banana	extracellular	5.19	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.88	15.87
KRH48502	Soybean	cytosol	4.9	11.11
GSMUA_Achr2P00070_001	Banana	extracellular	4.9	11.11
TraesCS1B01G260100.1	Wheat	cytosol	20.75	9.7
Bra002227.1-P	Field mustard	cytosol	8.65	5.57
CDX70872	Canola	cytosol	5.48	4.91

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFAM:PF00917	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7B01G375700
EnsemblPlants:TraesCS7B01G375700.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:-:640944474..640946804

Molecular Weight (calculated)

37887.4 Da

IEP (calculated)

5.986

GRAVY (calculated)

0.029

Length

347 amino acids

Sequence
(BLAST)

001: MANACTDLTD AVRSVQQLKI NGFCATSAMS TDYSIKSRWN VDGYEWEIRI YPASGTFSVA VELAFLSEPR TPVVRANLSC RLVDPRGVAE PSERTTNSGA
101: FWRPKGRFST VFVNLGQRRD LVASSYLKDD TLIVECTITV LKELPAPTIS VKPGPYMPPS NLHEHFGELL RSRAGSDVEF LVSGESFAAH KLVLSARSPV
201: FMAKFFGNMK EACSRSVEIK DMESDVFRAL LGFIYTDAVP ELDQELEAVP TMAQHLLAAA DRYGLDRLKV ICAGKLSGGI TVDTAATTLA LAEQLNCSHL
301: KAKCVEFITS TPAILDAVVA SEGYKHLEES CPSALTSIVI SMRATWN

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.