Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G375700.1 | Wheat | cytosol | 87.88 | 33.43 |
| HORVU7Hr1G107980.3 | Barley | cytosol, plastid | 62.12 | 31.66 |
| TraesCS7A01G474300.1 | Wheat | cytosol | 78.03 | 29.6 |
| HORVU7Hr1G108090.1 | Barley | cytosol | 69.7 | 25.7 |
| HORVU7Hr1G107780.4 | Barley | cytosol | 70.45 | 25.2 |
| HORVU7Hr1G108000.1 | Barley | cytosol | 67.42 | 23.86 |
| Zm00001d023740_P001 | Maize | cytosol | 56.82 | 20.38 |
| HORVU7Hr1G094540.2 | Barley | cytosol | 61.36 | 15.06 |
| GSMUA_Achr10P... | Banana | extracellular | 9.85 | 12.5 |
| GSMUA_Achr2P00150_001 | Banana | cytosol, extracellular, plastid | 4.55 | 9.52 |
| KRH48502 | Soybean | cytosol | 7.58 | 6.54 |
| HORVU1Hr1G062160.1 | Barley | cytosol | 34.09 | 6.25 |
| GSMUA_Achr2P00070_001 | Banana | extracellular | 5.3 | 4.58 |
| Bra002227.1-P | Field mustard | cytosol | 11.36 | 2.78 |
| CDX70872 | Canola | cytosol | 6.82 | 2.33 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G108200.1 | EnsemblPlantsGene:HORVU7Hr1G108200 | Gene3D:3.30.710.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:BTB/POZ_dom | InterPro:IPR000210 | InterPro:SKP1/BTB/POZ_sf | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF191 | PFAM:PF00651 |
| PFscan:PS50097 | SMART:SM00225 | SUPFAM:SSF54695 | UniParc:UPI000B4690B8 | UniProt:A0A287XRE7 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr7H:+:624754074..624755105
Molecular Weight (calculated)
14334.1 Da
IEP (calculated)
4.612
GRAVY (calculated)
0.148
Length
132 amino acids
Sequence
(BLAST)
(BLAST)
001: MPPSNLHEHF GELLRSGAAS DVAFLVSGEW FPAHKLVLAA RSPVFMAEFF GDMKETCSRS VEIKDTESAV FRALLGFVYT DTVPELDQEL EAVATMAQHL
101: LAAADRYERL KVICEGKLSG GITVDTAATT LA
101: LAAADRYERL KVICEGKLSG GITVDTAATT LA
001: MGTTRVCSEV SSGSSKSLSQ SLTVSTSTTE TVNGFHEFKI CGYSLAKGVG VGKYVASDTF MVGGYSWAIY FYPDGKSPED NSSYVSLFIA LASEGADVRA
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH
101: LFELTLVDQS GNGKHKVHSH FGRALDSGPY TLKYRGSMWG YKRFFRRSSL ESSDYLKENS LLVRCRVGVV KSVTEGPRYY NIPVPVSNLG QQLGNLLESG
201: KGCDVVFQVD GETFNAHKLV LATRSPVFNA QLFGPLGDRN TKCITIEDME APIFKVLLHF IYWDELPDMQ ELIGTDSTLA STLVAQHLLA AADRYALERL
301: KAICESKLCE GVAINTVATT LALAEQHHCL QLKAVCLKFV ALPENLKAVM QTDGFDYLKE SCPSLLTELL QYVARLSEHS VIVSGHRKEI FADGCDASGR
401: RVKPRLH
Arabidopsis Description
BPM1BPM1 [Source:UniProtKB/TrEMBL;Acc:A0A178UFC0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.