Factsheet for HORVU7Hr1G108000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G459700.1	Wheat	cytosol	89.54	89.54
HORVU7Hr1G108200.1	Barley	cytosol	23.86	67.42
HORVU7Hr1G107980.3	Barley	cytosol, plastid	38.87	55.98
HORVU7Hr1G107780.4	Barley	cytosol	54.96	55.56
HORVU7Hr1G108090.1	Barley	cytosol	49.06	51.12
Zm00001d023740_P001	Maize	cytosol	41.29	41.85
HORVU7Hr1G094540.2	Barley	cytosol	39.68	27.51
GSMUA_Achr10P...	Banana	extracellular	5.36	19.23
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.95	17.46
KRH48502	Soybean	cytosol	5.36	13.07
GSMUA_Achr2P00070_001	Banana	extracellular	5.09	12.42
HORVU1Hr1G062160.1	Barley	cytosol	20.11	10.42
CDX70872	Canola	cytosol	5.9	5.68
Bra002227.1-P	Field mustard	cytosol	8.04	5.57

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:HORVU7Hr1G108000	EnsemblPlants:HORVU7Hr1G108000.1	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	UniProt:M0XU53	InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379
PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like
UniParc:UPI0002967470	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:624190359..624192089

Molecular Weight (calculated)

41689.8 Da

IEP (calculated)

4.859

GRAVY (calculated)

-0.107

Length

373 amino acids

Sequence
(BLAST)

001: MEKACTNLTD VVRSVRLLKF KGYSLTTDIS SDHCFKSRWK VDGYEWEIRI YPRAGNPNRM NVRCVTLHLI FLSEARAGAV RTILRCCLVD PRGVFKPSRE
101: DRRSLTFRKP QDTSYTVVLM NEDEFEASGY VKDDSFTVQC TLDVLKELPD VTAPLEELHL PSSNLHLQFA DLLESETGAD VMFLVSGQSF AAHKLILAAR
201: SPVFMAEFFG NMKEKSSQSV EIEDMEGEVF KALLQFIYTD AVPEFRQQAE VDADAVYTDS VPEFEQQEDV VAEAATVMAQ HLLAAADRYG LDRLKLICAR
301: ELSGGINVDT AATALALAEQ HNCPELKARC VDFIIRTSAA LDDVLATEGF KHLEASCPLV VIDLLKTARG RKT

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.