CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G375000.1	Wheat	cytosol	29.54	61.93
TraesCS7A01G471800.1	Wheat	cytosol	21.14	61.9
OQU76847	Sorghum	cytosol	35.77	59.46
EER90192	Sorghum	cytosol	48.78	52.79
KXG20568	Sorghum	cytosol	51.49	52.2
TraesCS7A01G472800.1	Wheat	cytosol	48.24	50.86
HORVU7Hr1G108090.1	Barley	cytosol	48.24	49.72
TraesCS7A01G472400.1	Wheat	cytosol	43.09	49.07
TraesCS7B01G374000.1	Wheat	cytosol	45.26	48.97
TraesCS7B01G373600.1	Wheat	cytosol	41.19	48.87
TraesCS7D01G459500.1	Wheat	cytosol	46.07	48.57
TraesCS7A01G473500.1	Wheat	cytosol	46.07	48.02
TraesCS7D01G459600.1	Wheat	cytosol	41.73	45.03
EER98422	Sorghum	cytosol	44.17	45.03
TraesCS7B01G373900.2	Wheat	cytosol	45.8	44.71
KXG20567	Sorghum	cytosol	43.09	43.8
OQU79162	Sorghum	cytosol, plastid	37.94	40.11
OQU76843	Sorghum	cytosol	33.06	38.98
OQU76844	Sorghum	cytosol	39.02	38.4
KXG19711	Sorghum	cytosol	27.1	33.44
OQU76846	Sorghum	cytosol	24.66	32.16
GSMUA_Achr10P...	Banana	extracellular	5.42	19.23
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.98	17.46
KRH48502	Soybean	cytosol	5.96	14.38
GSMUA_Achr2P00070_001	Banana	extracellular	4.61	11.11
EES19490	Sorghum	nucleus	17.62	8.72
CDX70872	Canola	cytosol	7.05	6.72
Bra002227.1-P	Field mustard	cytosol	8.13	5.57

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8083178	InterPro:BPM_C
InterPro:BTB/POZ_dom	UniProt:C5Z7P1	EnsemblPlants:EER90188	ProteinID:EER90188	ProteinID:EER90188.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF180	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	EnsemblPlantsGene:SORBI_3010G222300	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A89609
RefSeq:XP_002438821.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56464481..56465654

Molecular Weight (calculated)

40073.5 Da

IEP (calculated)

4.741

GRAVY (calculated)

-0.156

Length

369 amino acids

Sequence
(BLAST)

001: MKPATAITKI TEAARSVQLL QIDGYSATET MSKSDYIGST WNVDGYEWEV RVDPEYDYSR ASWVALRLII LSKPRAVEVR AHFTGRLVDP TGRLQPSEDD
101: DSISHVFHHR REQTKVLLVE KRDDIASAGY LDNDSLTVEC SITVLRELPE VVFPPAATKE EVPSSPPPTP SSDLHKHLGE LLESKKGADV TFLLASSAGG
201: GERFPAHKTV LAARSRVFMA EFFGGMEERT SRVVEVQDVD PAAFEAMLRF VYTDVAPPEL DDDDDEEPAA AATMAQHLLA AADRYGLDRL KAICEAKLAG
301: CVDVGTAATT LALAEQHGCA MLKAKCVDFV TGSPETLDAV LATEGYAHLA ASCPLVLAEL LKSARGKKI

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.