CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76847	Sorghum	cytosol	32.59	45.95
OQU76844	Sorghum	cytosol	45.69	38.13
EER90192	Sorghum	cytosol	38.66	35.48
KXG20568	Sorghum	cytosol	40.89	35.16
EER98422	Sorghum	cytosol	39.94	34.53
EER90188	Sorghum	cytosol	38.98	33.06
KXG20567	Sorghum	cytosol	37.7	32.51
OQU79162	Sorghum	cytosol, plastid	35.46	31.81
KXG19711	Sorghum	cytosol	27.16	28.43
OQU76846	Sorghum	cytosol	19.81	21.91
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	3.19	15.87
GSMUA_Achr10P...	Banana	extracellular	5.11	15.38
GSMUA_Achr2P00070_001	Banana	extracellular	5.11	10.46
EES19490	Sorghum	nucleus	22.04	9.26
KRH48502	Soybean	cytosol	3.51	7.19
Bra002227.1-P	Field mustard	cytosol	9.58	5.57
CDX70872	Canola	cytosol	4.79	3.88

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	EntrezGene:8061589	UniProt:A0A1W0VU80
InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210
InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU76843	ProteinID:OQU76843	ProteinID:OQU76843.1
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF220	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
EnsemblPlantsGene:SORBI_3010G221900	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A89605	RefSeq:XP_002438817.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56438878..56439819

Molecular Weight (calculated)

34645.9 Da

IEP (calculated)

7.458

GRAVY (calculated)

-0.082

Length

313 amino acids

Sequence
(BLAST)

001: MTDPRHPYSG GDWIMSRVRL INNGAREVAA LFSCRLVDPR SPADSLEKTT SSVFYENKSR DVFLIRRSEL WESSRRYLKD GCIIVQCAIT TLPGHPKDAV
101: AYAAPSVPSS DLHKQFGELL LSQVGADITF VISGEWITAH RCVLAARSLV FMAKLFGNMK EKASSCFEID DMEVEVFRAM LHFIYTDTVP KLDQLKGEEA
201: TVIAQHLLEA ADRYGLERLK RICAEKMCMN IGVDTVATTL ALAEQHGCSK LKSKCMEFIS ACPKNLQAVA ATEGYKHLEA SCPLVLTELL SSRLSLKGNK
301: HEVVGHSTVG DSK

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.