CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76847	Sorghum	cytosol	28.8	48.65
Os06t0668300-00	Rice	cytosol	42.13	46.06
OQU76843	Sorghum	cytosol	38.13	45.69
EER98422	Sorghum	cytosol	40.0	41.44
EER90192	Sorghum	cytosol	37.6	41.35
EER90188	Sorghum	cytosol	38.4	39.02
KXG20568	Sorghum	cytosol	36.53	37.64
KXG20567	Sorghum	cytosol	36.0	37.19
KXG19711	Sorghum	cytosol	27.73	34.78
OQU79162	Sorghum	cytosol, plastid	29.33	31.52
OQU76846	Sorghum	cytosol	21.33	28.27
GSMUA_Achr10P...	Banana	extracellular	4.8	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	1.87	11.11
GSMUA_Achr2P00070_001	Banana	extracellular	4.0	9.8
EES19490	Sorghum	nucleus	18.93	9.53
KRH48502	Soybean	cytosol	3.47	8.5
Bra002227.1-P	Field mustard	cytosol	8.8	6.12
CDX70872	Canola	cytosol	3.73	3.62

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1W0VUB5	InterPro:BPM_C
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083
InterPro:IPR008974	InterPro:MATH/TRAF_dom	EnsemblPlants:OQU76844	ProteinID:OQU76844	ProteinID:OQU76844.1	PFAM:PF00651
PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF220	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3010G222000
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0009DC87FE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr10:-:56444548..56445812

Molecular Weight (calculated)

40864.7 Da

IEP (calculated)

5.605

GRAVY (calculated)

-0.064

Length

375 amino acids

Sequence
(BLAST)

001: MQNYAACINL TNSARSVQLF KIDAFTATRE KGQGSIASTR TSVGGYDWVI NYHPRVWFSD QYWIMFRITL DSNGTGVVAS FACRLVDVVD QTGGGQHLGS
101: SSSPVPAAIT SATLSKGQAN DVYITTRSKL ASSGYLKDDS FLVECVITVL IENRSPTQDA AAAAANLAPT TTSAAAAPPS DLGRHFGELW RNQKGTDVTF
201: LVSGEPIAAH KCVLAARSPF FMAELFGDMK EKASQHVEIE DMRPEVFRAL MQFIYTDTSP PELQVEGKEE EEEEDARMMA QHLLVAADRY GMERLKIICE
301: EKMCADISVD TVSTALALAE QHGCSELKAR CIKFIVATPA NLRAVVKTEG YAHLIASCPS VVHDLLLAIM ADRHK

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.