CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU76847	Sorghum	cytosol	46.04	70.72
KXG20568	Sorghum	cytosol	55.43	51.92
EER90188	Sorghum	cytosol	52.79	48.78
EER98422	Sorghum	cytosol	45.75	43.09
KXG20567	Sorghum	cytosol	43.7	41.05
OQU76843	Sorghum	cytosol	35.48	38.66
OQU79162	Sorghum	cytosol, plastid	38.71	37.82
OQU76844	Sorghum	cytosol	41.35	37.6
KXG19711	Sorghum	cytosol	29.03	33.11
OQU76846	Sorghum	cytosol	25.51	30.74
GSMUA_Achr10P...	Banana	extracellular	5.57	18.27
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.64	14.29
KRH48502	Soybean	cytosol	5.87	13.07
GSMUA_Achr2P00070_001	Banana	extracellular	4.4	9.8
EES19490	Sorghum	nucleus	19.06	8.72
CDX70872	Canola	cytosol	7.04	6.2
Bra002227.1-P	Field mustard	cytosol	7.62	4.82

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
UniProt:C5Z7P5	EnsemblPlants:EER90192	ProteinID:EER90192	ProteinID:EER90192.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom	PFAM:PF00651
PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF180	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3010G222600
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	UniParc:UPI0001A8960D	RefSeq:XP_002438825.1	SEG:seg

Description

hypothetical protein

Coordinates

chr10:-:56474460..56475995

Molecular Weight (calculated)

38075.7 Da

IEP (calculated)

6.390

GRAVY (calculated)

-0.177

Length

341 amino acids

Sequence
(BLAST)

001: MEHGRTVLTE AVRKVQLLKI DGYCATSVMK HSDYIKSKWN VDGHEWEVRI HPNYYNNNNH WDPWMAVKLI LHGEPRRNKL KVNLSCRLVD TSHRLDPSAE
101: KSLSHVFPSC DGCTVAVMSR DIIPSSGYVV NDSLTVQCTI TVLKELADIE VPANTEAPPL PPSDLERHFG ELWQGQRGAD VTFVLDTRER FLAHKAILAA
201: RSPVFMAEFF GGMNEKSSQS VRIEDMEASV FKAPELNEEL EVAMAMAQHL LAAADRYGLD RLKLMCETKL AGGISIDTVA TTLALAEQHN CSLLKTKCVD
301: FIARSPETLD AVLATEGYNH LVESCPLVLT ELLRAAHGRR I

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.