CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER98422	Sorghum	cytosol	37.81	29.56
OQU76847	Sorghum	cytosol	22.97	29.28
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	32.51	26.98
KXG20567	Sorghum	cytosol	33.92	26.45
EER90192	Sorghum	cytosol	30.74	25.51
Os06t0251200-01	Rice	cytosol	31.45	25.28
EER90188	Sorghum	cytosol	32.16	24.66
KXG20568	Sorghum	cytosol	30.39	23.63
TraesCS7D01G460000.1	Wheat	cytosol	27.92	23.3
OQU79162	Sorghum	cytosol, plastid	28.62	23.21
OQU76844	Sorghum	cytosol	28.27	21.33
KXG19711	Sorghum	cytosol	21.55	20.4
OQU76843	Sorghum	cytosol	21.91	19.81
TraesCS7A01G474500.1	Wheat	cytosol	7.42	16.67
HORVU7Hr1G094540.2	Barley	cytosol	29.33	15.43
GSMUA_Achr10P...	Banana	extracellular	5.65	15.38
TraesCS7B01G375800.1	Wheat	cytosol	3.53	10.42
KRH48502	Soybean	cytosol	4.59	8.5
EES19490	Sorghum	nucleus	20.14	7.65
GSMUA_Achr2P00070_001	Banana	extracellular	3.53	6.54
Bra002227.1-P	Field mustard	cytosol	10.25	5.38
CDX70872	Canola	cytosol	4.59	3.36
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	0.71	3.17

Protein Annotations

Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	UniProt:A0A1W0VUA6	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
EnsemblPlants:OQU76846	ProteinID:OQU76846	ProteinID:OQU76846.1	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379
PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	EnsemblPlantsGene:SORBI_3010G222200	SUPFAM:SSF49599	SUPFAM:SSF54695
InterPro:TRAF-like	UniParc:UPI0009DC8C2F	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:56458540..56459494

Molecular Weight (calculated)

30876.0 Da

IEP (calculated)

7.740

GRAVY (calculated)

-0.211

Length

283 amino acids

Sequence
(BLAST)

001: METLTEVVRS SKQIKIQGFS VTSAMSDGDA LKSRWKVGGY DWEVQLFPNS IVVLHLYLRS NIVSPDSSVK VMFSARVVDP SGKLKRHQGI LSVAHNFKRS
101: GYRCYGGPLM SRSELQTSDD LVPSSGLNHH LGELLHKGTG ADVTLVAAGE SFAAHKAILA SRSPVFMAEF FGHMKEKRSP RVEIKDMDAA ILGAMLRFIY
201: TDSVPEPEDG DDGEVAAMHT AQHLLAAADR YGIDRLKVAC EDRLFDGVTV DTARGDDSGL GGAARLLVLP PESQVRRAHR CKP

Best Arabidopsis Sequence Match ( AT3G06190.5 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKGTED HSLLV

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.