Factsheet for TraesCS7D01G460000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G459300.1	Wheat	cytosol	21.83	50.68
TraesCS7D01G459200.1	Wheat	cytosol	46.61	47.16
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	46.31	46.04
TraesCS7D01G459500.1	Wheat	cytosol	47.49	46.0
TraesCS7D01G461100.1	Wheat	cytosol	20.06	45.95
TraesCS7D01G458600.1	Wheat	cytosol, plastid	47.49	45.87
TraesCS7D01G459600.1	Wheat	cytosol	45.72	45.32
TraesCS7D01G460100.1	Wheat	cytosol	45.72	44.93
TraesCS7D01G459400.1	Wheat	cytosol	19.17	43.92
TraesCS7D01G459700.1	Wheat	cytosol	45.43	41.29
Zm00001d036646_P002	Maize	cytosol	42.48	40.45
Zm00001d036641_P001	Maize	cytosol	44.25	39.58
TraesCS7D01G395400.1	Wheat	cytosol	40.12	39.31
Os06t0251200-01	Rice	cytosol	40.41	38.92
Zm00001d036643_P002	Maize	cytosol	41.59	38.84
TraesCS7D01G459800.1	Wheat	cytosol	25.07	32.69
Zm00001d036647_P001	Maize	plastid	28.91	28.82
OQU76846	Sorghum	cytosol	23.3	27.92
GSMUA_Achr10P...	Banana	extracellular	5.01	16.35
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.65	14.29
KRH48502	Soybean	cytosol	6.19	13.73
GSMUA_Achr2P00070_001	Banana	extracellular	4.42	9.8
TraesCS1D01G248900.1	Wheat	cytosol	21.24	9.7
Bra002227.1-P	Field mustard	cytosol	8.85	5.57
CDX70872	Canola	cytosol	5.9	5.17

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PFscan:PS50144	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191
InterPro:SKP1/BTB/POZ_sf	SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7D01G460000
EnsemblPlants:TraesCS7D01G460000.1	TIGR:cd00121	TIGR:cd14736	SEG:seg	:	:

Description

No Description!

Coordinates

chr7D:+:576755032..576756051

Molecular Weight (calculated)

37192.8 Da

IEP (calculated)

5.233

GRAVY (calculated)

0.041

Length

339 amino acids

Sequence
(BLAST)

001: MLRDGFRTMV TIGSDDCIRS GMCAVGRYEW EICVYPAWTA GSPDGDKWVA LRLVLLSKPN TPAVRANLRC QAVNPNLWYE TPVKKQPGVF GRPKNSTPFV
101: YLVSVSDVQN KGYLAADALT VECTITVLKE SPAPTSPAKE MPVPSSNLHK NLGDLPQTEM GADVTFLVSD ESFAAHKNIL AARSPVFKAQ FFGEMKEKVS
201: QDVVVDGMEA AGFKAMLHFI YTDTVPELEQ GLEAVMAQHL LVAADRYGLD KLKMFCENKL SSGITVDTAA TTLALAEQHN CLRLKASCVE FIVSTPEVID
301: AVLETEGYMD LAASCFFVWV GCKLFFCAGR SSQVYAWEK

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.