Factsheet for TraesCS7D01G459200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G471400.1	Wheat	cytosol	75.52	69.89
TraesCS7D01G459300.1	Wheat	cytosol	29.55	67.81
TraesCS7D01G458600.1	Wheat	cytosol, plastid	66.87	63.82
TraesCS7D01G459400.1	Wheat	cytosol	24.18	54.73
TraesCS7D01G461100.1	Wheat	cytosol	22.69	51.35
TraesCS7D01G460100.1	Wheat	cytosol	52.54	51.01
TraesCS7D01G459700.1	Wheat	cytosol	55.52	49.87
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	49.55	48.68
TraesCS7D01G459500.1	Wheat	cytosol	49.25	47.14
TraesCS7D01G395400.1	Wheat	cytosol	48.66	47.11
TraesCS7D01G459600.1	Wheat	cytosol	47.76	46.78
TraesCS7D01G460000.1	Wheat	cytosol	47.16	46.61
Zm00001d023740_P001	Maize	cytosol	42.69	38.86
TraesCS7D01G459800.1	Wheat	cytosol	28.06	36.15
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.69	14.29
GSMUA_Achr10P...	Banana	extracellular	4.18	13.46
KRH48502	Soybean	cytosol	5.37	11.76
GSMUA_Achr2P00070_001	Banana	extracellular	4.78	10.46
TraesCS1D01G248900.1	Wheat	cytosol	22.39	10.11
CDX70872	Canola	cytosol	6.27	5.43
Bra002227.1-P	Field mustard	cytosol	7.76	4.82

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7D01G459200	EnsemblPlants:TraesCS7D01G459200.1
TIGR:cd00121	TIGR:cd14736	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:576633767..576634774

Molecular Weight (calculated)

37406.0 Da

IEP (calculated)

8.151

GRAVY (calculated)

-0.072

Length

335 amino acids

Sequence
(BLAST)

001: MGDNDCIKSR WNFDGYEWEF RVYPNCWGYS VAVELAFLSK PRRASVKRAF LRKARRGSVR VAVCCRLVDP AGTLEPSNEV CEQRVFSRPN DYIFKFFILR
101: SKLAASGYLR GDSFTVQCTI DVLKELPATD PVKEVPVPSS NLHRHLAELL RSKTGADVTF LVCGKSFAAH KLILAARSPV FMAEFFGDMK ENCARRVEIK
201: DMQAAVFKSL LHFIYTDTVP EFDEKGKEVM VLAQHLLAAA DRYDLDRLKL VCESKLSGGI SVDTAATSLA LAEQHNCPQL KAKCVQFIVR NREVLDAVLA
301: TEGYKYLAAS CPSVLSDLLE SSLRVGESTS TDAYS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.