Factsheet for TraesCS7D01G395400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G401800.1	Wheat	cytosol	90.75	88.2
TraesCS7D01G459300.1	Wheat	cytosol	25.14	59.59
TraesCS7D01G459400.1	Wheat	cytosol	21.39	50.0
TraesCS7D01G461300.1	Wheat	cytosol, mitochondrion	48.55	49.27
TraesCS7D01G459200.1	Wheat	cytosol	47.11	48.66
TraesCS7D01G459700.1	Wheat	cytosol	52.02	48.26
TraesCS7D01G459500.1	Wheat	cytosol	48.55	48.0
TraesCS7D01G460100.1	Wheat	cytosol	46.82	46.96
TraesCS7D01G458600.1	Wheat	cytosol, plastid	45.66	45.01
TraesCS7D01G461100.1	Wheat	cytosol	18.21	42.57
TraesCS7D01G459600.1	Wheat	cytosol	41.04	41.52
TraesCS7D01G460000.1	Wheat	cytosol	39.31	40.12
TraesCS7D01G459800.1	Wheat	cytosol	29.48	39.23
Zm00001d023740_P001	Maize	cytosol	40.75	38.32
GSMUA_Achr10P...	Banana	extracellular	5.2	17.31
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.89	15.87
GSMUA_Achr2P00070_001	Banana	extracellular	5.2	11.76
KRH48502	Soybean	cytosol	4.91	11.11
TraesCS1D01G248900.1	Wheat	cytosol	21.1	9.84
CDX70872	Canola	cytosol	8.09	7.24
Bra002227.1-P	Field mustard	cytosol	8.67	5.57

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974
InterPro:MATH/TRAF_dom	PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf
SMART:SM00225	SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS7D01G395400	EnsemblPlants:TraesCS7D01G395400.1
TIGR:cd00121	TIGR:cd14736	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:510337570..510338642

Molecular Weight (calculated)

38369.2 Da

IEP (calculated)

7.087

GRAVY (calculated)

-0.161

Length

346 amino acids

Sequence
(BLAST)

001: MASARTNLTD VVRSVQLLRV NGYCMTKTMD SLEGSIKSRW NVYGYDWEIR LYSAGLPGHH SMYLSWIAAE LFFLGEARTR NVKATLGCRL VDPRGKLKPS
101: EERRHSGKFK NPQDTSHPIL LIEKSDLERS AYLRDDSFTV QCTITVLKEI PDLPATISVR GIMEVPSSNL HEHLAELLRS GTGADVTFLV AGESFAAHKA
201: ILAARSPVLM AEFFGQMKER SSHDAEVKDM EAAVFKVPEL ADETTETVTV MTQHLLAAAD RYGLDRLKLI CEDRLSGGIS VDTAATTLAL AEQHDCSLLK
301: KCLEFIVRTP ATLDAVMATD GYQHLEASCP LVLRELLKSA RGRKRS

Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)

001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS

Arabidopsis Description

BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.