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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plasma membrane 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plasma membrane
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019513_P001 Maize cytosol 57.42 59.54
Zm00001d019441_P001 Maize cytosol 55.49 57.71
EER98422 Sorghum cytosol 56.87 57.18
Os06t0251200-01 Rice cytosol 44.51 46.02
Os06t0668300-00 Rice cytosol 39.01 41.4
Os08t0198300-01 Rice cytosol 37.64 38.27
Os05t0398100-01 Rice cytosol 16.76 27.23
GSMUA_Achr10P... Banana extracellular 6.32 22.12
GSMUA_Achr2P00150_001 Banana cytosol, extracellular, plastid 2.47 14.29
KRH48502 Soybean cytosol 5.77 13.73
GSMUA_Achr2P00070_001 Banana extracellular 4.95 11.76
Bra002227.1-P Field mustard cytosol 10.71 7.24
CDX70872 Canola cytosol 4.95 4.65
Protein Annotations
Gene3D:1.25.40.420Gene3D:2.60.210.10Gene3D:3.30.710.10MapMan:35.1EntrezGene:4341793EMBL:AK108036
ProteinID:BAD45423.1ProteinID:BAD45438.1ProteinID:BAF20232.1ProteinID:BAS99056.1InterPro:BPM_CInterPro:BTB/POZ_dom
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:IPR000210InterPro:IPR002083InterPro:IPR008974
InterPro:MATH/TRAF_domEnsemblPlantsGene:Os06g0668400EnsemblPlants:Os06t0668400-01PFAM:PF00651PFscan:PS50097PFscan:PS50144
PANTHER:PTHR26379PANTHER:PTHR26379:SF191UniProt:Q655S9InterPro:SKP1/BTB/POZ_sfSMART:SM00225SUPFAM:SSF49599
SUPFAM:SSF54695InterPro:TRAF-likeUniParc:UPI000043A2B6RefSeq:XP_015642772.1SEG:seg:
Description
MATH-BTB protein 8, MDC protein with a BTB domain 8, MDC protein having BTB domain 8Kelch related domain containing protein. (Os06t0668400-01)
Coordinates
chr6:-:27683632..27685556
Molecular Weight (calculated)
39448.1 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.140
Length
364 amino acids
Sequence
(BLAST)
001: MGKLTDVTRS NDIQLKIVGH SLTMAMDDGE FFSSRRYCVG GHDWEIRLRP KDPWVGRRDR PLTLKLVLRG APRTGSGSVK AQLSCCLVDP TQKLRPSEMK
101: TVSHKFHKPG DYSPRAVFMA RDELEASGYL TDDSYVVQCA ITVLREQPEI AAAAAAAGDS ANAAVAPSSE LHAYLGALLE SKTGADVTFV VSGESFAAHK
201: AILASRSPVF MAELFGAMKV KASERVEVKD MEAPVFKAIL HFVYTDTVPE LDHRDGEETE AASTATAMAQ HLLAGADRYG LERLKLICES KLAERIDVDT
301: VSTTLALAEQ HDCSHLKAKC VEFIAAGTAE NLDAVLATDG FKHLEASCPS VLTDLVKVAR GRKN
Best Arabidopsis Sequence Match ( AT2G39760.1 )
(BLAST)
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.