Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7A01G471200.1 | Wheat | cytosol | 28.49 | 70.34 |
TraesCS7D01G459400.1 | Wheat | cytosol | 29.05 | 70.27 |
TraesCS7A01G472000.1 | Wheat | cytosol | 27.93 | 67.11 |
TraesCS7A01G471900.1 | Wheat | cytosol | 25.42 | 65.47 |
TraesCS7A01G474500.1 | Wheat | cytosol | 22.07 | 62.7 |
TraesCS7A01G471800.1 | Wheat | cytosol | 22.07 | 62.7 |
TraesCS7A01G472500.1 | Wheat | cytosol | 58.66 | 55.7 |
TraesCS7A01G472400.1 | Wheat | cytosol | 43.02 | 47.53 |
TraesCS7A01G471400.1 | Wheat | cytosol | 47.77 | 47.24 |
TraesCS7A01G472800.1 | Wheat | cytosol | 45.81 | 46.86 |
TraesCS4A01G432700.1 | Wheat | cytosol | 41.62 | 45.57 |
TraesCS7A01G401800.1 | Wheat | cytosol | 44.69 | 44.94 |
TraesCS7A01G472200.1 | Wheat | cytosol | 44.97 | 43.87 |
TraesCS7A01G473500.1 | Wheat | cytosol | 43.3 | 43.79 |
TraesCS7A01G057100.1 | Wheat | cytosol | 43.02 | 43.38 |
TraesCS7A01G474300.1 | Wheat | cytosol | 41.62 | 42.82 |
TraesCS7A01G473100.1 | Wheat | cytosol | 44.13 | 42.13 |
Zm00001d023740_P001 | Maize | cytosol | 38.27 | 37.23 |
TraesCS7A01G474100.1 | Wheat | cytosol | 22.07 | 25.32 |
TraesCS7A01G472700.1 | Wheat | plastid | 13.13 | 25.27 |
GSMUA_Achr10P... | Banana | extracellular | 5.03 | 17.31 |
GSMUA_Achr2P00150_001 | Banana | cytosol, extracellular, plastid | 2.79 | 15.87 |
KRH48502 | Soybean | cytosol | 6.42 | 15.03 |
GSMUA_Achr2P00070_001 | Banana | extracellular | 4.75 | 11.11 |
TraesCS1A01G249400.1 | Wheat | cytosol | 20.95 | 10.25 |
Bra002227.1-P | Field mustard | cytosol | 9.78 | 6.49 |
CDX70872 | Canola | cytosol | 5.59 | 5.17 |
Protein Annotations
Gene3D:1.25.40.420 | Gene3D:2.60.210.10 | Gene3D:3.30.710.10 | MapMan:35.1 | InterPro:BPM_C | InterPro:BTB/POZ_dom |
GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR002083 | InterPro:IPR008974 |
InterPro:MATH/TRAF_dom | PFAM:PF00651 | PFscan:PS50097 | PANTHER:PTHR26379 | PANTHER:PTHR26379:SF191 | InterPro:SKP1/BTB/POZ_sf |
SMART:SM00225 | SUPFAM:SSF49599 | SUPFAM:SSF54695 | InterPro:TRAF-like | EnsemblPlantsGene:TraesCS7A01G472300 | EnsemblPlants:TraesCS7A01G472300.1 |
TIGR:cd00121 | TIGR:cd14736 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr7A:-:668310990..668312066
Molecular Weight (calculated)
39711.7 Da
IEP (calculated)
5.829
GRAVY (calculated)
-0.129
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQKSVKPSR NHLSDQKSFR YLPLLPAMAS AIAAWRGRRE IVSPVILIYD PNVVDSRGLS TFVALRLIFL SEPPASAVRT TLRACLVDQR GVPKPSHEVS
101: QRITFKKPQD SSERIKLEGL GYVKDDSFSV QCTLDVLKEI GEETALEELH LPSSDLHLQL AQLLQSETGA DVTFLVSGES FSAHKLIVAA RSPVFMAEFF
201: GDMKEKCSQC VEIKDMDAEV FKALLQFIYT DTMPELRQRE WDAEDEAEYE QQEEADAKAA TVMAQHLLAA ADRYGLDRLK HICAGKLSSS INVDTAATTL
301: ALAEQHNCPE LKTRCVQFII RTPATLDAVL ATEGYKHLEA SCPLVVIDLL KAAHGRKI
101: QRITFKKPQD SSERIKLEGL GYVKDDSFSV QCTLDVLKEI GEETALEELH LPSSDLHLQL AQLLQSETGA DVTFLVSGES FSAHKLIVAA RSPVFMAEFF
201: GDMKEKCSQC VEIKDMDAEV FKALLQFIYT DTMPELRQRE WDAEDEAEYE QQEEADAKAA TVMAQHLLAA ADRYGLDRLK HICAGKLSSS INVDTAATTL
301: ALAEQHNCPE LKTRCVQFII RTPATLDAVL ATEGYKHLEA SCPLVVIDLL KAAHGRKI
001: MSTVGGIEQL IPDSVSTSFI ETVNGSHQFT IQGYSLAKGM SPGKFIQSDI FSVGGYDWAI YFYPDGKNPE DQSSYISLFI ALASDSNDIR ALFELTLMDQ
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
101: SGKGKHKVHS HFDRALEGGP YTLKYKGSMW GYKRFFKRSA LETSDYLKDD CLVINCTVGV VRARLEGPKQ YGIVLPLSNM GQGLKDLLDS EVGCDIAFQV
201: GDETYKAHKL ILAARSPVFR AQFFGPIGNN NVDRIVIDDI EPSIFKAMLS FIYTDVLPNV HEITGSTSAS SFTNMIQHLL AAADLYDLAR LKILCEVLLC
301: EKLDVDNVAT TLALAEQHQF LQLKAFCLEF VASPANLGAV MKSEGFKHLK QSCPTLLSEL LNTVAAADKS STSGQSNKKR SASSVLGCDT TNVRQLRRRT
401: RKEVRAVS
Arabidopsis Description
BPM3BTB/POZ and MATH domain-containing protein 3 [Source:UniProtKB/Swiss-Prot;Acc:O22286]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.