Factsheet for TraesCS4A01G432700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G063900.1	Wheat	cytosol	100.0	100.0
TraesCS7A01G057100.1	Wheat	cytosol	91.13	83.94
TraesCS7A01G471200.1	Wheat	cytosol	24.77	55.86
TraesCS7A01G471800.1	Wheat	cytosol	18.96	49.21
TraesCS7A01G471900.1	Wheat	cytosol	20.49	48.2
TraesCS7A01G472500.1	Wheat	cytosol	54.13	46.95
TraesCS7A01G474500.1	Wheat	cytosol	17.74	46.03
TraesCS7A01G472000.1	Wheat	cytosol	20.49	44.97
TraesCS7A01G472400.1	Wheat	cytosol	42.51	42.9
TraesCS7A01G471400.1	Wheat	cytosol	46.48	41.99
TraesCS7A01G472300.1	Wheat	cytosol, mitochondrion	45.57	41.62
TraesCS7A01G472800.1	Wheat	cytosol	43.73	40.86
TraesCS7A01G401800.1	Wheat	cytosol	43.73	40.17
TraesCS7A01G474300.1	Wheat	cytosol	41.59	39.08
TraesCS7A01G472200.1	Wheat	cytosol	43.73	38.96
TraesCS7A01G473500.1	Wheat	cytosol	40.06	37.01
TraesCS7A01G473100.1	Wheat	cytosol	41.59	36.27
Zm00001d023740_P001	Maize	cytosol	38.53	34.24
TraesCS7A01G474100.1	Wheat	cytosol	28.44	29.81
GSMUA_Achr10P...	Banana	extracellular	6.12	19.23
TraesCS7A01G472700.1	Wheat	plastid	8.87	15.59
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	2.45	12.7
KRH48502	Soybean	cytosol	5.81	12.42
GSMUA_Achr2P00070_001	Banana	extracellular	4.28	9.15
TraesCS1A01G249400.1	Wheat	cytosol	19.88	8.88
Bra002227.1-P	Field mustard	cytosol	7.95	4.82
CDX70872	Canola	cytosol	4.89	4.13

Protein Annotations

Gene3D:1.25.40.420	Gene3D:2.60.210.10	MapMan:35.1	InterPro:BPM_C	InterPro:BTB/POZ_dom	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR000210	InterPro:IPR002083	InterPro:IPR008974	InterPro:MATH/TRAF_dom
PFAM:PF00651	PFscan:PS50097	PANTHER:PTHR26379	PANTHER:PTHR26379:SF191	InterPro:SKP1/BTB/POZ_sf	SMART:SM00225
SUPFAM:SSF49599	SUPFAM:SSF54695	InterPro:TRAF-like	EnsemblPlantsGene:TraesCS4A01G432700	EnsemblPlants:TraesCS4A01G432700.1	TIGR:cd00121
TIGR:cd14736	:	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:703441590..703442573

Molecular Weight (calculated)

36371.5 Da

IEP (calculated)

5.414

GRAVY (calculated)

-0.141

Length

327 amino acids

Sequence
(BLAST)

001: MPGRDNHIKR RWNLGGHDWE IRVYPHGGEP SAPSWVAINV VLLSECAVAV VTTIRGCLVD PKGVREPSEE ICRSVAFRKP QDKSSQMLLM PWYTLNKSRY
101: LKDDSFIVQC TLEVLKELPD IPEPEVHVPV PTSNLHQHFA ELLQSQMGAD VTFLVSGESI VAHKYILAVR SRVFKAAFLG DMIERGSECV EIKDMEAAVF
201: KALLHFIYTD TVLEFEQQAG AEAMITDTVP ESRQQDEAHE QAASVMALAQ HLLAAADRYG LDRLKLICAR KLYDGIKVDT AATTLAFAEQ YNCWELQKRC
301: ADFITKAYAG SSSLDAVAAT EGTSGRD

Best Arabidopsis Sequence Match ( AT3G06190.1 )
(BLAST)

001: MDTIRVSKEV PGSSKSTAQS LTESTSRTET INGSHEFKIS GYSLVKGMGI GKYVASDTFM VGGYSWAIYF YPDGKSPEDN SVYVSLFIAL ASEGADVRAL
101: FELTLVDQSG NERHKVHSHF GRTLESGPYT LKYRGSMWGY KRFFKRSLLE SSDYLKDNGL LVRCCVGVVK SRTEGPRCYN IPVPVSGLGQ QFGKLLESGK
201: GADVTFEVDG ETFPAHKLVL AARSAVFRAQ LFGPLRSENT NCIIIEDVQA PIFKMLLHFI YWDEMPDMQD LIGTDLKWAS TLVAQHLLAA ADRYALERLR
301: TICESKLCEG ISINTVATTL ALAEQHHCFQ LKAACLKFIA LPENLKAVME TDGFDYLKES CPSLLSELLE YVARLSEHSL TSSGHRKELF ADGCDLNGRR
401: VKQRLH

Arabidopsis Description

BPM2BTB/POZ and MATH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M8J9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.