Factsheet for GSMUA_Achr10P05330_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, nucleus, plastid

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70872	Canola	cytosol	49.64	35.92
GSMUA_Achr9P17600_001	Banana	cytosol	66.43	25.0
KRH48502	Soybean	cytosol	6.79	12.42
GSMUA_Achr10P...	Banana	extracellular	1.43	3.85
Bra002227.1-P	Field mustard	cytosol	7.14	3.71
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	2.5	3.47
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	2.14	2.42
GSMUA_Achr10P...	Banana	endoplasmic reticulum	3.21	2.31
GSMUA_Achr10P...	Banana	cytosol	0.71	2.13
GSMUA_Achr2P00070_001	Banana	extracellular	1.07	1.96
GSMUA_Achr2P00100_001	Banana	cytosol	1.07	1.61
GSMUA_Achr10P...	Banana	cytosol	0.36	1.2
GSMUA_Achr10P...	Banana	cytosol	0.71	1.16
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	1.43	0.92
GSMUA_Achr2P00050_001	Banana	extracellular, plasma membrane	0.36	0.69
GSMUA_Achr2P00090_001	Banana	cytosol	0.36	0.53
GSMUA_Achr10P...	Banana	cytosol	0.36	0.5
GSMUA_Achr2P00150_001	Banana	cytosol, extracellular, plastid	0.0	0.0

Protein Annotations

Gene3D:1.25.10.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	ncoils:Coil
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSMUA_Achr10G05330_001	EnsemblPlants:GSMUA_Achr10P05330_001	EnsemblPlants:GSMUA_Achr10T05330_001
InterPro:IPR000225	InterPro:IPR011989	UniProt:M0RFL0	PFAM:PF00514	PFscan:PS50176	PANTHER:PTHR23315
PANTHER:PTHR23315:SF164	SMART:SM00185	SUPFAM:SSF48371	UniParc:UPI0002966D3A	SEG:seg	:

Description

Putative Vacuolar protein 8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G05330_001]

Coordinates

chr10:-:15068625..15071970

Molecular Weight (calculated)

30581.7 Da

IEP (calculated)

7.921

GRAVY (calculated)

-0.279

Length

280 amino acids

Sequence
(BLAST)

001: MEAVQQQLKR RKRQKRKLEE EDAASAAESE AGGEGGGEEI CCQRSRQALA REVRAKVQVL ERTFSWRFAD RAAAKRATHI LAELAKDEKV VNVIVEEGAV
101: PALVKHLQEP PPLLGSEGSA NEGERPFEHE VEKGSAFALG LLAVKPEHQQ LIVDAGALPL LVDLLKRHKK GFNCQVVNSV IRRAADAITN LAHENSNIKT
201: SVRIEGGIPP LVELLKSTDA KVQRAAAGAL RTLSFKNYSN KNQIVDCNAL PTLILMLQSE DAAIHYEAVS QCTSTYVLIA

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.