Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES19490 | Sorghum | nucleus | 90.61 | 93.29 |
| Zm00001d038134_P001 | Maize | cytosol | 87.87 | 84.78 |
| HORVU1Hr1G062160.1 | Barley | cytosol | 76.53 | 81.53 |
| TraesCS1A01G249400.1 | Wheat | cytosol | 77.71 | 81.42 |
| TraesCS1B01G260100.1 | Wheat | cytosol | 78.75 | 81.4 |
| TraesCS1D01G248900.1 | Wheat | cytosol | 78.49 | 81.13 |
| GSMUA_Achr9P17600_001 | Banana | cytosol | 71.71 | 73.92 |
| VIT_05s0020g03020.t01 | Wine grape | cytosol | 68.71 | 73.91 |
| Os05t0398100-01 | Rice | cytosol | 21.51 | 73.66 |
| KRH77872 | Soybean | cytosol | 66.49 | 72.24 |
| KRH27617 | Soybean | cytosol | 66.1 | 71.61 |
| KRG91259 | Soybean | cytosol | 65.32 | 70.86 |
| CDX92539 | Canola | cytosol | 64.67 | 70.76 |
| KRH35552 | Soybean | cytosol | 65.06 | 70.58 |
| AT5G19330.1 | Thale cress | cytosol | 65.32 | 70.56 |
| Bra002228.1-P | Field mustard | nucleus | 66.1 | 70.03 |
| CDX88895 | Canola | cytosol, nucleus, plastid | 64.93 | 69.65 |
| Bra006500.1-P | Field mustard | cytosol, nucleus, plastid | 64.8 | 69.51 |
| PGSC0003DMT400051860 | Potato | cytosol | 64.15 | 69.39 |
| Solyc06g084250.2.1 | Tomato | cytosol | 63.23 | 68.79 |
| Solyc09g065210.2.1 | Tomato | cytosol | 63.23 | 68.5 |
| PGSC0003DMT400033530 | Potato | cytosol | 63.23 | 68.5 |
| VIT_07s0104g00020.t01 | Wine grape | cytosol | 62.84 | 68.37 |
| KRG95533 | Soybean | cytosol | 50.46 | 54.28 |
| KRH67208 | Soybean | cytosol | 49.8 | 54.18 |
| CDX69674 | Canola | cytosol | 47.07 | 51.06 |
| CDX97221 | Canola | cytosol, mitochondrion | 47.07 | 51.06 |
| AT5G13060.1 | Thale cress | cytosol, mitochondrion, plastid | 47.33 | 49.25 |
| CDX70871 | Canola | cytosol | 17.08 | 49.06 |
| Bra008860.1-P | Field mustard | plastid | 45.11 | 48.94 |
| CDX91149 | Canola | cytosol, mitochondrion | 46.02 | 48.42 |
| CDX85673 | Canola | plastid | 46.02 | 48.16 |
| Bra023389.1-P | Field mustard | plastid | 38.33 | 45.16 |
| PGSC0003DMT400051857 | Potato | endoplasmic reticulum | 10.69 | 44.81 |
| CDY51336 | Canola | mitochondrion | 12.65 | 41.45 |
| CDY13990 | Canola | nucleus | 64.54 | 39.13 |
| CDY15719 | Canola | plastid | 6.65 | 36.69 |
| Bra030036.1-P | Field mustard | plastid | 8.47 | 36.11 |
| Zm00001d019441_P001 | Maize | cytosol | 8.21 | 18.0 |
| Zm00001d019513_P001 | Maize | cytosol | 8.21 | 17.95 |
| Zm00001d036641_P001 | Maize | cytosol | 8.34 | 16.89 |
| Zm00001d023740_P001 | Maize | cytosol | 7.82 | 16.3 |
| Zm00001d036646_P002 | Maize | cytosol | 7.56 | 16.29 |
| Zm00001d046968_P001 | Maize | cytosol | 7.69 | 16.21 |
| Zm00001d036643_P002 | Maize | cytosol | 7.43 | 15.7 |
| Zm00001d036647_P001 | Maize | plastid | 6.65 | 15.0 |
| Zm00001d012798_P001 | Maize | cytosol | 5.35 | 14.34 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100279213 | Gene3D:3.30.710.10 | MapMan:35.1 | UniProt:A0A1D6FQK0 | ProteinID:AQK93901.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Armadillo | InterPro:BTB/POZ_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | InterPro:IPR000210 | InterPro:IPR000225 | InterPro:IPR011989 | PFAM:PF00514 | PFAM:PF00651 |
| PFscan:PS50097 | PFscan:PS50176 | PANTHER:PTHR23315 | PANTHER:PTHR23315:SF164 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00185 |
| SMART:SM00225 | SUPFAM:SSF48371 | SUPFAM:SSF54695 | UniParc:UPI000844BEF9 | EnsemblPlantsGene:Zm00001d010341 | EnsemblPlants:Zm00001d010341_P002 |
| EnsemblPlants:Zm00001d010341_T002 | SEG:seg | : | : | : | : |
Description
ARM REPEAT PROTEIN INTERACTING WITH ABF2
Coordinates
chr8:-:110486620..110507178
Molecular Weight (calculated)
83700.4 Da
IEP (calculated)
6.638
GRAVY (calculated)
-0.096
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAEQQKQQP QRPRRKGLKR KLEDEASAAV AAAATSAAAS AAAASLGSAG ADDDNEEEDG SAGTPEICCR HSHAALAREV RAQVDALVRC ASSWRHADRA
101: AAKRATHVLA ELAKNEEVVN VIVEGGAVAA LVCHLEEPAV AAPTQEEQQL RPFEHEVEKG AAFALGLLAV KPEHQQLVVD AGALPPLVKL LKRQKNTTNS
201: RVVNSVIKRA ADAITNLAHE NSNIKTSVRM EGGIPPLVQL LESQDLKVQR AAAGALRTLA FKNDENKTQI VQCNALPTLI LMLRSEDAAI HYEAVGVIGN
301: LVHSSPKIKK EVLNAGALQP VIGLLSSCCT ESQREAALLL GQFASADSDC KVLNKYGVLT VYKSSVNFAN LLVHIVQRGA VCPLIEMLQS ADVQLREMSA
401: FALGRLAQDT HNQAGIAYNG GLVPLLKLLD SENGSLQHNA AFALYGVADN EDYVSDFIKV GGVQKLQDGE FIVQATKDCV AKTLKRLEEK INGRVLKHLL
501: YLMRVGEKSV QRRVALALAH LCAPEDQSSV FIDNNGLDLL LDLLISMSSK HQQDGSAALY KLANKAAALS PMDAAPPSPT PQACKRIIKF KFTLYYVYLG
601: EQYVNSSTLS DVTFLVEGWY YFMTLISSEK DARDIEIPNI RWDVFELMMR FIYTGSVQVT SEIAQDLLRA GDQYLLEGLK RLCEYTIAKD VNLDNVSDMY
701: DLSEAFHAVS LRHTCILYIL EHFNKICTRA GSAQLIQRVI PELRNFLTKA LSSSRSPSTT DDRNLQT
101: AAKRATHVLA ELAKNEEVVN VIVEGGAVAA LVCHLEEPAV AAPTQEEQQL RPFEHEVEKG AAFALGLLAV KPEHQQLVVD AGALPPLVKL LKRQKNTTNS
201: RVVNSVIKRA ADAITNLAHE NSNIKTSVRM EGGIPPLVQL LESQDLKVQR AAAGALRTLA FKNDENKTQI VQCNALPTLI LMLRSEDAAI HYEAVGVIGN
301: LVHSSPKIKK EVLNAGALQP VIGLLSSCCT ESQREAALLL GQFASADSDC KVLNKYGVLT VYKSSVNFAN LLVHIVQRGA VCPLIEMLQS ADVQLREMSA
401: FALGRLAQDT HNQAGIAYNG GLVPLLKLLD SENGSLQHNA AFALYGVADN EDYVSDFIKV GGVQKLQDGE FIVQATKDCV AKTLKRLEEK INGRVLKHLL
501: YLMRVGEKSV QRRVALALAH LCAPEDQSSV FIDNNGLDLL LDLLISMSSK HQQDGSAALY KLANKAAALS PMDAAPPSPT PQACKRIIKF KFTLYYVYLG
601: EQYVNSSTLS DVTFLVEGWY YFMTLISSEK DARDIEIPNI RWDVFELMMR FIYTGSVQVT SEIAQDLLRA GDQYLLEGLK RLCEYTIAKD VNLDNVSDMY
701: DLSEAFHAVS LRHTCILYIL EHFNKICTRA GSAQLIQRVI PELRNFLTKA LSSSRSPSTT DDRNLQT
001: MIISKSFKAP LKFSVKSSTA PVISNHPPME NHPKRQRTTR LAARNLKRKL SHNTDGAPIV TQLIDIDDEP IDLVVAIRRH VEVLNSSFSD PDFDHEAVKE
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV
Arabidopsis Description
ABAP1ARMADILLO BTB ARABIDOPSIS PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:B7U179]
SUBAcon: [cytosol,plastid,mitochondrion]
SUBAcon: [cytosol,plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.