CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0398100-01	Rice	cytosol	54.31	64.73
PGSC0003DMT400051857	Potato	endoplasmic reticulum	28.09	40.98
GSMUA_Achr2P00090_001	Banana	cytosol	26.97	38.5
GSMUA_Achr10P...	Banana	endoplasmic reticulum	55.06	37.69
GSMUA_Achr10P...	Banana	cytosol	27.72	37.0
CDX92539	Canola	cytosol	72.28	27.53
CDX88895	Canola	cytosol, nucleus, plastid	71.91	26.85
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	40.82	25.12
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	20.6	22.18
HORVU1Hr1G062160.1	Barley	cytosol	58.43	21.67
GSMUA_Achr9P17600_001	Banana	cytosol	58.8	21.1
Solyc09g065210.2.1	Tomato	cytosol	55.81	21.05
TraesCS1A01G249400.1	Wheat	cytosol	57.68	21.04
Solyc06g084250.2.1	Tomato	cytosol	55.43	20.99
TraesCS1B01G260100.1	Wheat	cytosol	58.05	20.89
TraesCS1D01G248900.1	Wheat	cytosol	58.05	20.89
VIT_07s0104g00020.t01	Wine grape	cytosol	55.06	20.85
EES19490	Sorghum	nucleus	58.05	20.81
Zm00001d038134_P001	Maize	cytosol	58.05	19.5
Zm00001d010341_P002	Maize	cytosol	49.06	17.08
CDX69674	Canola	cytosol	41.2	15.56
CDY13990	Canola	nucleus	71.91	15.18
CDX85673	Canola	plastid	41.57	15.14
CDX97221	Canola	cytosol, mitochondrion	40.07	15.13
CDX91149	Canola	cytosol, mitochondrion	41.2	15.09
GSMUA_Achr2P00100_001	Banana	cytosol	5.24	7.53
GSMUA_Achr10P...	Banana	cytosol	4.49	6.94
CDX70872	Canola	cytosol	7.49	5.17
CDY51336	Canola	mitochondrion	4.49	5.13
CDY15719	Canola	plastid	1.5	2.88
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	1.87	2.48

Protein Annotations

EnsemblPlants:CDX70871	EnsemblPlantsGene:GSBRNA2T00140769001	Gene3D:3.30.710.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:BTB/POZ_dom	InterPro:IPR000210	InterPro:SKP1/BTB/POZ_sf	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	PFAM:PF00651
PFscan:PS50097	ProteinID:CDX70871	ProteinID:CDX70871.1	SEG:seg	SMART:SM00225	SUPFAM:SSF54695
UniParc:UPI0004EDEA04	MapMan:35.1	:	:	:	:

Description

BnaC03g09550D

Coordinates

chrLK031791:-:2521681..2523144

Molecular Weight (calculated)

30487.8 Da

IEP (calculated)

6.514

GRAVY (calculated)

-0.149

Length

267 amino acids

Sequence
(BLAST)

001: MRISEKSIQR RLALALAHFC SPEDQRTIFI DENGIFLLTG LELLLGLLGS TNTKQQLDGA AALYKLANKS MALSPVDAAA PSPTQRVYLG EQYVNNATLY
101: DVTFLVEGRR FYAHRICLLA SSDAFRAMFD GGYREKDARD IEIPNIKWEV FELMMRFIHW ITDQYLLEGL KRLCEYTIAQ DVTLENIGSM YDLSEAFHAM
201: SLRQACILFI LEHFDKLSSM HGQNELVQRT IPEIREYFSR ALTKSTTNLQ KPEAVECGGR RRLQSLS

Best Arabidopsis Sequence Match ( AT5G13060.1 )
(BLAST)

001: MIISKSFKAP LKFSVKSSTA PVISNHPPME NHPKRQRTTR LAARNLKRKL SHNTDGAPIV TQLIDIDDEP IDLVVAIRRH VEVLNSSFSD PDFDHEAVKE
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV

Arabidopsis Description

ABAP1ARMADILLO BTB ARABIDOPSIS PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:B7U179]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.