Factsheet for Solyc09g065210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc01g006140.2.1
Solyc01g010820.2.1
Solyc03g006420.2.1
Solyc06g008510.2.1
Solyc12g013880.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13060.1	Solyc01g010820.2.1	AT1G26830.1	15659098
AT5G13060.1	Solyc01g010820.2.1	AT1G69670.1	15659098
AT5G13060.1	Solyc01g006140.2.1	AT2G31270.1	18818695
AT5G13060.1	Solyc06g008510.2.1	AT2G31270.1	18818695
AT5G13060.1	Solyc03g006420.2.1	AT4G14700.1	18818695
AT5G13060.1	Solyc12g013880.1.1	AT5G16690.1	18818695

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033530	Potato	cytosol	99.01	99.01
Solyc06g084250.2.1	Tomato	cytosol	87.57	87.94
VIT_07s0104g00020.t01	Wine grape	cytosol	76.13	76.45
GSMUA_Achr9P17600_001	Banana	cytosol	74.44	70.83
HORVU1Hr1G062160.1	Barley	cytosol	71.47	70.28
Os05t0398100-01	Rice	cytosol	22.03	69.64
TraesCS1A01G249400.1	Wheat	cytosol	71.61	69.26
EES19490	Sorghum	nucleus	72.18	68.59
TraesCS1B01G260100.1	Wheat	cytosol	71.61	68.33
TraesCS1D01G248900.1	Wheat	cytosol	71.47	68.19
Zm00001d038134_P001	Maize	cytosol	71.61	63.77
Zm00001d010341_P002	Maize	cytosol	68.5	63.23
GSMUA_Achr10P...	Banana	endoplasmic reticulum	34.32	62.31
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	21.33	60.89
KRH67208	Soybean	cytosol	60.59	60.85
KRG95533	Soybean	cytosol	60.88	60.45
GSMUA_Achr10P...	Banana	cytosol	14.41	58.96
GSMUA_Achr10P...	Banana	cytosol	15.96	56.5
CDX70871	Canola	cytosol	21.05	55.81
GSMUA_Achr2P00090_001	Banana	cytosol	14.69	55.62
CDX69674	Canola	cytosol	55.23	55.3
CDX97221	Canola	cytosol, mitochondrion	54.8	54.88
CDX85673	Canola	plastid	54.94	53.07
AT5G13060.1	Thale cress	cytosol, mitochondrion, plastid	55.23	53.05
CDX91149	Canola	cytosol, mitochondrion	54.52	52.95
Bra008860.1-P	Field mustard	plastid	52.82	52.9
GSMUA_Achr2P00100_001	Banana	cytosol	13.84	52.69
Bra023389.1-P	Field mustard	plastid	46.33	50.38
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	13.98	49.01
CDY51336	Canola	mitochondrion	14.97	45.3
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	26.69	43.55
CDY15719	Canola	plastid	7.77	39.57
Bra030036.1-P	Field mustard	plastid	9.75	38.33

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989
UniProt:K4CUE8	PFAM:PF00514	PFAM:PF00651	PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315
PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695
EnsemblPlantsGene:Solyc09g065210.2	EnsemblPlants:Solyc09g065210.2.1	UniParc:UPI000276C517	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:-:63182415..63191278

Molecular Weight (calculated)

78376.2 Da

IEP (calculated)

6.079

GRAVY (calculated)

-0.128

Length

708 amino acids

Sequence
(BLAST)

001: MENQKLTERS SSSARRSLKR KLEEDLQDDR KVSPSISSED GHQDLEREVR TQVEILESSF SSSESDRASS KRAIHVLSEF AKNEEIVNVI VDCGAVPALV
101: QHLQAPPLVS EGEGSHIPYE HEVEKGSAFT LGLLAIKPEH QQLIVDAGAL PHLVNLLKRH RDAQNSRAVN GVIRRAADAV TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFV DSKVQRAAAG SLRTLAFKND ENKNQIVECS ALPTLILMLR SEDTAIHYEA VGVIGNLVHS SPNIKKEVLL AGALQPVIGL LSSSCSESQR
301: EAALLLGQFA ATDSDCKIHI VQRGAVPPLI EMLQSPDAQL REMSAFALGR LAQDTHNQAG IAHCGGIIPL LKLLDSKNGS LQHNAAFALY GLADNEDNVA
401: DLIKVGGVQK LQDGEFIVQP TRDCVAKTLK RLEEKIHGRI LGHLLYLMRI GEKVIQRRVA LALAHLCAPD DQKIIFIDNS GLELLLELFD STNLKHKRDG
501: SAALCKLANK ASSLSQVDAA PPSPVPQVYL GEQYVNNSTL SDVTFLVEGK RFYAHRICLL ASSDAFRAMF DGGYRERDAK DIEIPNIRWD VFELMMRYIY
601: TGSVDVNLDV AQDLLRAADQ YLLEGLKRLC EYAIAQDISV ESVSLMFELS EAFNALTLRN ACILFILEKF DQLSVMPWYS HLIQRVLPET RSYFERVLTR
701: AIQNDMRV

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.