Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plastid, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69674 | Canola | cytosol | 81.95 | 85.43 |
| CDX97221 | Canola | cytosol, mitochondrion | 81.41 | 84.87 |
| Bra008860.1-P | Field mustard | plastid | 78.83 | 82.18 |
| CDX91149 | Canola | cytosol, mitochondrion | 79.65 | 80.52 |
| CDX85673 | Canola | plastid | 79.65 | 80.08 |
| Bra023389.1-P | Field mustard | plastid | 69.34 | 78.49 |
| AT5G19330.1 | Thale cress | cytosol | 53.46 | 55.49 |
| VIT_07s0104g00020.t01 | Wine grape | cytosol | 53.05 | 55.46 |
| Solyc06g084250.2.1 | Tomato | cytosol | 52.92 | 55.32 |
| Solyc09g065210.2.1 | Tomato | cytosol | 53.05 | 55.23 |
| HORVU1Hr1G062160.1 | Barley | cytosol | 50.75 | 51.94 |
| GSMUA_Achr9P17600_001 | Banana | cytosol | 52.37 | 51.88 |
| EES19490 | Sorghum | nucleus | 51.97 | 51.41 |
| TraesCS1A01G249400.1 | Wheat | cytosol | 50.75 | 51.09 |
| TraesCS1D01G248900.1 | Wheat | cytosol | 50.75 | 50.4 |
| TraesCS1B01G260100.1 | Wheat | cytosol | 50.75 | 50.4 |
| GSMUA_Achr10P... | Banana | cytosol | 11.8 | 50.29 |
| KRG95533 | Soybean | cytosol | 48.03 | 49.65 |
| KRH67208 | Soybean | cytosol | 46.81 | 48.94 |
| Zm00001d038134_P001 | Maize | cytosol | 52.37 | 48.55 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 25.37 | 47.95 |
| Zm00001d010341_P002 | Maize | cytosol | 49.25 | 47.33 |
| GSMUA_Achr2P00100_001 | Banana | cytosol | 11.67 | 46.24 |
| Os05t0398100-01 | Rice | cytosol | 13.98 | 45.98 |
| GSMUA_Achr2P00160_001 | Banana | cytosol, extracellular | 15.47 | 45.97 |
| GSMUA_Achr10P... | Banana | cytosol | 11.8 | 43.5 |
| GSMUA_Achr2P00090_001 | Banana | cytosol | 10.99 | 43.32 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 11.13 | 40.59 |
| GSMUA_Achr10P... | Banana | extracellular, plasma membrane | 20.62 | 35.02 |
| PGSC0003DMT400051857 | Potato | endoplasmic reticulum | 8.28 | 33.33 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:3.30.710.10 | MapMan:35.1 | EntrezGene:831145 | Symbol:ABAP1 | ProteinID:AED91846.1 |
| InterPro:ARM-like | InterPro:ARM-type_fold | ArrayExpress:AT5G13060 | EnsemblPlantsGene:AT5G13060 | RefSeq:AT5G13060 | TAIR:AT5G13060 |
| RefSeq:AT5G13060-TAIR-G | EnsemblPlants:AT5G13060.1 | TAIR:AT5G13060.1 | EMBL:AY074524 | InterPro:Armadillo | Unigene:At.28791 |
| UniProt:B7U179 | InterPro:BTB/POZ_dom | ProteinID:CAC05434.1 | EMBL:FJ422582 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005654 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006261 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008285 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0019538 |
| GO:GO:0031261 | GO:GO:0042127 | GO:GO:2000104 | InterPro:IPR000210 | InterPro:IPR000225 | InterPro:IPR011989 |
| RefSeq:NP_196810.5 | PFAM:PF00514 | PFAM:PF00651 | PO:PO:0000293 | PFscan:PS50097 | PFscan:PS50176 |
| PANTHER:PTHR23315 | PANTHER:PTHR23315:SF164 | InterPro:SKP1/BTB/POZ_sf | SMART:SM00185 | SMART:SM00225 | SUPFAM:SSF48371 |
| SUPFAM:SSF54695 | UniParc:UPI000188F6D4 | SEG:seg | : | : | : |
Description
ABAP1ARMADILLO BTB ARABIDOPSIS PROTEIN 1 [Source:UniProtKB/Swiss-Prot;Acc:B7U179]
Coordinates
chr5:+:4142910..4147140
Molecular Weight (calculated)
81365.6 Da
IEP (calculated)
6.787
GRAVY (calculated)
-0.018
Length
737 amino acids
Sequence
(BLAST)
(BLAST)
001: MIISKSFKAP LKFSVKSSTA PVISNHPPME NHPKRQRTTR LAARNLKRKL SHNTDGAPIV TQLIDIDDEP IDLVVAIRRH VEVLNSSFSD PDFDHEAVKE
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV
101: AAADIADLAK IDENVEIIVE NGAIPALVRY LESPLVVCGN VPKSCEHKLE KDCALALGLI AAIQPGYQQL IVDAGAIVPT VKLLKRRGEC GECMFANAVI
201: RRAADIITNI AHDNPRIKTN IRVEGGIAPL VELLNFPDVK VQRAAAGALR TVSFRNDENK SQIVELNALP TLVLMLQSQD STVHGEAIGA IGNLVHSSPD
301: IKKEVIRAGA LQPVIGLLSS TCLETQREAA LLIGQFAAPD SDCKVHIAQR GAITPLIKML ESSDEQVVEM SAFALGRLAQ DAHNQAGIAH RGGIISLLNL
401: LDVKTGSVQH NAAFALYGLA DNEENVADFI KAGGIQKLQD DNFTVQPTRD CVVRTLKRLQ NKIHGPVLNQ LLYLMRTAEK TVQIRIALAL AHLCDPKDGK
501: LIFIDNNGVE FLLELLYFSS NKQQRYSSSA LYELAKKATS FAPEDSAPCS PTQQVFLGEK FVNNPTMSDV TFLIDGKQFY AHKIGLVASS DIFRAMFDGL
601: YKERNAQNVE IPNIRWEVFE LMMKFIYSGR INIAKHLAKD LLVAADQYLL EGLKRQCEYT IAQEICLDNI PEMYELADTF NASALRRACT LFVLEHFTKL
701: SSQLWFAKFV KQIIPEIRSY MTDILTRPVE ASPPTVV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.