CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra002228.1-P	Field mustard	nucleus	99.29	96.13
AT5G19330.1	Thale cress	cytosol	93.72	92.54
CDX88895	Canola	cytosol, nucleus, plastid	91.44	89.65
KRH77872	Soybean	cytosol	79.03	78.47
KRH27617	Soybean	cytosol	79.03	78.25
VIT_05s0020g03020.t01	Wine grape	cytosol	79.03	77.7
KRG91259	Soybean	cytosol	77.46	76.8
KRH35552	Soybean	cytosol	77.32	76.66
Os05t0398100-01	Rice	cytosol	23.54	73.66
CDX70871	Canola	cytosol	27.53	72.28
GSMUA_Achr9P17600_001	Banana	cytosol	76.18	71.77
HORVU1Hr1G062160.1	Barley	cytosol	72.9	70.97
EES19490	Sorghum	nucleus	74.75	70.34
TraesCS1A01G249400.1	Wheat	cytosol	73.04	69.95
TraesCS1B01G260100.1	Wheat	cytosol	73.32	69.27
TraesCS1D01G248900.1	Wheat	cytosol	73.18	69.14
Zm00001d038134_P001	Maize	cytosol	74.18	65.41
CDX70872	Canola	cytosol	35.95	65.12
Zm00001d010341_P002	Maize	cytosol	70.76	64.67
GSMUA_Achr10P...	Banana	endoplasmic reticulum	33.95	61.03
GSMUA_Achr10P...	Banana	cytosol	14.41	58.38
CDY13990	Canola	nucleus	98.86	54.78
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	18.97	53.63
GSMUA_Achr10P...	Banana	cytosol	15.26	53.5
CDX69674	Canola	cytosol	53.92	53.47
CDX97221	Canola	cytosol, mitochondrion	53.49	53.04
CDX91149	Canola	cytosol, mitochondrion	52.92	50.89
CDX85673	Canola	plastid	53.21	50.89
GSMUA_Achr2P00090_001	Banana	cytosol	13.55	50.8
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	14.27	49.51
GSMUA_Achr2P00100_001	Banana	cytosol	12.98	48.92
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	27.1	43.78
CDY51336	Canola	mitochondrion	14.12	42.31
CDY15719	Canola	plastid	7.56	38.13

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
InterPro:BTB/POZ_dom	EnsemblPlants:CDX92539	ProteinID:CDX92539	ProteinID:CDX92539.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00154322001	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	PFAM:PF00514
PFAM:PF00651	PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf
SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695	UniParc:UPI0004EF01F6	SEG:seg

Description

BnaA10g15780D

Coordinates

chrLK031872:+:1119772..1124267

Molecular Weight (calculated)

76913.5 Da

IEP (calculated)

6.660

GRAVY (calculated)

-0.151

Length

701 amino acids

Sequence
(BLAST)

001: MEQQQPERRE GRSFPERKGQ KRKLEEGAAA AAEDREISAS TTTDGGGDAI LNEIAAQVSV LNSAFSWQES DRAAAKRATQ VLAELAKNED LVNVIVDGGA
101: VPALMTHLQA PPYSEGDLAQ KPFEHEVEKG SAFALGLLAI KPDYQKLIVD KGALPHLVNL LKRSKDGSTS RAVNSVIRRA ADAITNLAHE NSSIKTRVSR
201: LEGGIPPLVD LLEFSDSKVQ RAAAGALRTL AFKNDDNKNQ IVECSALPKL ILMLGSEDAA IHYEAVGVIG NLVHSSPNIK KEVLSAGALQ PVIGLLSSCC
301: PESQREAALL LGQFASTDSD CKVHIVQRGA VRPLIEMLQS PDVQLKEMSA FALGRLAQDS HNQAGIAHSG GLGPLLKLLD SRNGSLQHNA AFALYGLADN
401: EDNVSDFIRV GGIQKLQDGE FIVQATKDCV SKTLKRLEEK IHGRVLRHLL YLMRISEKSI QRRVALALAH LWLELLLGLL GSTNTKQQLD GAAALYKLAN
501: KSMALSPVDA APPSPTQRVY LGEQYVNSAT LSDVTFLVEG RRFYAHRICL LASSDAFRAM FDGGYREKDA RDIEIPNIKW EVFELMMRFI YTGSVDITIE
601: ISQDLLRAAD QYLLEGLKRL CEYTIAQDIT LENIGGMYDL SEAFHAMSLR QACILFILEH FDKLSTMHGQ NQLVQRTIPE IREYFCRALT KSTTNLQGLR
701: L

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.