CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91259	Soybean	cytosol	96.18	96.18
KRH27617	Soybean	cytosol	89.11	88.98
KRH77872	Soybean	cytosol	88.68	88.81
VIT_05s0020g03020.t01	Wine grape	cytosol	83.03	82.33
AT5G19330.1	Thale cress	cytosol	78.08	77.75
CDX92539	Canola	cytosol	76.66	77.32
Bra002228.1-P	Field mustard	nucleus	77.93	76.11
CDX88895	Canola	cytosol, nucleus, plastid	76.8	75.94
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	76.8	75.94
Os05t0398100-01	Rice	cytosol	23.34	73.66
GSMUA_Achr9P17600_001	Banana	cytosol	76.8	72.98
HORVU1Hr1G062160.1	Barley	cytosol	74.12	72.78
TraesCS1A01G249400.1	Wheat	cytosol	74.12	71.58
TraesCS1B01G260100.1	Wheat	cytosol	74.4	70.89
EES19490	Sorghum	nucleus	74.68	70.87
TraesCS1D01G248900.1	Wheat	cytosol	74.26	70.75
GSMUA_Achr10P...	Banana	endoplasmic reticulum	37.34	67.69
Zm00001d038134_P001	Maize	cytosol	74.4	66.16
Zm00001d010341_P002	Maize	cytosol	70.58	65.06
GSMUA_Achr10P...	Banana	cytosol	15.42	63.01
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	20.79	59.27
KRG95533	Soybean	cytosol	59.55	59.05
KRH67208	Soybean	cytosol	58.27	58.44
GSMUA_Achr10P...	Banana	cytosol	16.41	58.0
GSMUA_Achr2P00090_001	Banana	cytosol	15.13	57.22
GSMUA_Achr2P00100_001	Banana	cytosol	14.57	55.38
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	14.71	51.49
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	28.43	46.31
KRH48502	Soybean	cytosol	9.34	43.14
CDY13990	Canola	nucleus	76.38	42.69

Protein Annotations

Gene3D:1.25.10.10	EntrezGene:100784348	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02006689	InterPro:ARM-like
InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:BTB/POZ_dom	EnsemblPlantsGene:GLYMA_10G250100	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	UniProt:K7LLB0	EnsemblPlants:KRH35552	ProteinID:KRH35552
ProteinID:KRH35552.1	ProteinID:KRH35553.1	PFAM:PF00514	PFAM:PF00651	PFscan:PS50097	PFscan:PS50176
PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371
SUPFAM:SSF54695	UniParc:UPI000233CAE8	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:47824975..47834365

Molecular Weight (calculated)

78021.7 Da

IEP (calculated)

6.546

GRAVY (calculated)

-0.150

Length

707 amino acids

Sequence
(BLAST)

001: MELQRRQDQS LSQRKGQKRK LDEEQHHEDR QISPAPPTAD ERAALLSDVA EQVSILESTF TWNEADRSAA KRATHALADL AKNEDVVNLI VEGGAIPALV
101: KHLQAPPLSD RVQNPLPFEH EVEKGSAFTL GLLAVKPEHQ QFIVDSGALT HLVDLLKRHR NGLTSRAINS LIRRAADAIT NLAHENSSIK TRVRMEGGIP
201: PLVHLLDFAD AKVQRAAAGA LRTLAFKNDE NKNQIVECNA LPTLILMLRS EDAGVHYEAV GVIGNLVHSS PNIKKEVLLA GALQPVIGLL SSCCSESQRE
301: AALLLGQFAA TDSDCKVHIV QRGAVQPLIE MLQSPDVQLR EMSAFALGRL AQDPHNQAGI AHNGGLVPLL KLLDSKNGSL QHNAAFALYG LADNEDNASD
401: FIRVGGVQRL QDGEFIVQAT KDCVAKTLKR LEEKIHGRVL NHLLYLMRVS EKGCQRRVAL ALAHLCSSDD QRIIFIDHYG LELLIGLLGS SSSKQQLDGA
501: VALCKLADKA STLSPVDAAP PSPTPQVYLG EQYVNNATLS DVTFLVEGKR FYAHRICLLA SSDAFRAMFD GGYREKEARD IEIPNIRWEV FELMMRFVYC
601: GSVDVTLDIA QDLLRAADQY LLEGLKRLCE YTIAQDISLE NVSSMYELTE AFNAISLRHA CILFILEQFD KLSSRPGHSL LIQRITPEIR NYFVKALTKA
701: NSQNDRL

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.