CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92539	Canola	cytosol	54.78	98.86
Bra002228.1-P	Field mustard	nucleus	54.55	95.3
AT5G19330.1	Thale cress	cytosol	51.86	92.39
CDX88895	Canola	cytosol, nucleus, plastid	50.51	89.37
KRH77872	Soybean	cytosol	43.56	78.05
KRH27617	Soybean	cytosol	43.56	77.82
VIT_05s0020g03020.t01	Wine grape	cytosol	43.64	77.42
KRG91259	Soybean	cytosol	42.77	76.52
KRH35552	Soybean	cytosol	42.69	76.38
Os05t0398100-01	Rice	cytosol	12.96	73.21
CDX70871	Canola	cytosol	15.18	71.91
GSMUA_Achr9P17600_001	Banana	cytosol	42.06	71.51
HORVU1Hr1G062160.1	Barley	cytosol	40.4	70.97
EES19490	Sorghum	nucleus	41.34	70.2
TraesCS1A01G249400.1	Wheat	cytosol	40.47	69.95
TraesCS1B01G260100.1	Wheat	cytosol	40.63	69.27
TraesCS1D01G248900.1	Wheat	cytosol	40.55	69.14
CDX70872	Canola	cytosol	20.08	65.63
Zm00001d038134_P001	Maize	cytosol	41.03	65.28
Zm00001d010341_P002	Maize	cytosol	39.13	64.54
GSMUA_Achr10P...	Banana	endoplasmic reticulum	18.58	60.26
GSMUA_Achr10P...	Banana	cytosol	7.83	57.23
CDX69674	Canola	cytosol	29.72	53.18
CDX97221	Canola	cytosol, mitochondrion	29.49	52.76
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	10.28	52.42
GSMUA_Achr10P...	Banana	cytosol	8.22	52.0
CDX91149	Canola	cytosol, mitochondrion	29.17	50.62
CDX85673	Canola	plastid	29.33	50.61
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	7.91	49.51
GSMUA_Achr2P00090_001	Banana	cytosol	7.27	49.2
GSMUA_Achr2P00100_001	Banana	cytosol	7.04	47.85
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	15.34	44.7
CDY51336	Canola	mitochondrion	7.59	41.03
CDY15719	Canola	plastid	4.19	38.13

Protein Annotations

Gene3D:1.10.246.200	Gene3D:1.25.10.10	MapMan:23.5.1.5	Gene3D:3.30.710.10	Gene3D:3.80.10.10	UniProt:A0A078FHR3
InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo	InterPro:BTB/POZ_dom	EnsemblPlants:CDY13990	ProteinID:CDY13990
ProteinID:CDY13990.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	EnsemblPlantsGene:GSBRNA2T00078502001
InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR001611	InterPro:IPR011989	InterPro:IPR032675	InterPro:IPR038214
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00514	PFAM:PF00651	PFAM:PF13516	PFAM:PF13943
PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf	SMART:SM00185
SMART:SM00225	SMART:SM00368	SUPFAM:SSF48371	SUPFAM:SSF52047	SUPFAM:SSF54695	UniParc:UPI0004EF21B4
InterPro:WPP_dom	InterPro:WPP_sf	SEG:seg	:	:	:

Description

BnaC09g38360DBnaC09g38360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FHR3]

Coordinates

chrLK032039:-:681000..688129

Molecular Weight (calculated)

138504.0 Da

IEP (calculated)

4.767

GRAVY (calculated)

-0.200

Length

1265 amino acids

Sequence
(BLAST)

0001: MEQQQPERRE GRSFPERKGQ KRKLEEGAAA AAEDREISAS TTTDGGGDAI LNEIAAQVSV LNSAFSWQES DRAAAKRATQ VLAELAKNED LVNVIVDGGA
0101: VPALMTHLQA PPYIDGDLAQ KPFEHEVEKG SAFALGLLAI KPEYQKLIVD KGALPHLVNL LKRSKDGSTS RAVNSVIRRA ADAITNLAHE NSSIKTRVSR
0201: LEGGIPPLVD LLEFSDSKVQ RAAAGALRTL AFKNDDNKNQ IVDCSALPTL ILMLGSEDAA IHYEAVGVIG NLVHSSPNIK KEVLSAGALQ PVIGLLSSCC
0301: PESQREAALL LGQFASTDSD CKVHIVQRGA VRPLIEMLQS PDVQLKEMSA FALGRLAQDS HNQAGIAHSG GLGPLLKLLD SRNGSLQHNA AFALYGLADN
0401: EDNVSDFIRV GGIQKLQDGE FIVQATKDCV SKTLKRLEEK IHGRVLRHLL YLMRISEKSI QRRVALALAH LWLELLLGLL GSTNTKQQLD GAAALYKLAN
0501: KSMALSPVEA APPSPTQRVY LGEQYVNSAT LSDVTFLVEG RRFYAHRICL LASSDAFRAM FDGGYREKDA RDIEIPNIKW EVFELMMRFI YTGSVDITIE
0601: ISQDLLRAAD QYLLEGLKRL CEYTIAQDIT LENIGGMYDL SEAFHAMSLR QACILFILEH FDKLSTMHGQ NQLVQRTIPE IREYFCRALT KSTTNLQGLR
0701: LFSRLDASSG NYPLCNAISD LFTITLLMAD TLDSRPHTFS IKLWPPSLPT RQALIERMTN NLSSKTIFTD KFGSLTKDQA MENAKRIEDV AFSTANLQFE
0801: REPDGDGGSA VQLYAKECSK MILEVLKKGP VCKAEQVSSA SPCKETVFDI SKDKRAFIEA EEAEELLKPL KEPGNVYTKI CFSNRSFGLG AARVAEPILA
0901: SLKDQLKVVD LSDFVAGRPE VEALEVMNIF SSALDGSVLS SLNLSDNALG EKGVRAFGTL LKSLSSLEEL YLMNDGISKE AAQAVSELIP STEKLRVLHF
1001: HNNMTGDEGA VAISEVVKRS PLLENFRCSS TRVGEGGGIA LSEALENCTL MEKLDLRDNM FGTEAGVSLS KTLSRFEHLA EVYLSYLNLE DEGAIAIANA
1101: LKDSAAPIEV LEMAGNDITV EAASAIAACV AAKQDLNKLN LSENELKDEG CVQIAKSVEE EHLKLQYIDM SNNYIRRAGA RALAQVVIKK EGFKLLNIDG
1201: NIISEEGIEE VKEILKKTPE VLGALDENDP DGEEEEDDEE DEEKEGEGND ELESKLKKLE VNEDD

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.