Factsheet for Bra002228.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92539	Canola	cytosol	96.13	99.29
AT5G19330.1	Thale cress	cytosol	92.54	94.37
Bra006500.1-P	Field mustard	cytosol, nucleus, plastid	90.61	91.75
KRH77872	Soybean	cytosol	77.9	79.89
KRH27617	Soybean	cytosol	77.9	79.66
VIT_05s0020g03020.t01	Wine grape	cytosol	78.04	79.24
KRG91259	Soybean	cytosol	76.24	78.08
KRH35552	Soybean	cytosol	76.11	77.93
Os05t0398100-01	Rice	cytosol	22.79	73.66
GSMUA_Achr9P17600_001	Banana	cytosol	75.55	73.52
HORVU1Hr1G062160.1	Barley	cytosol	72.51	72.92
EES19490	Sorghum	nucleus	74.31	72.21
TraesCS1A01G249400.1	Wheat	cytosol	72.65	71.86
TraesCS1B01G260100.1	Wheat	cytosol	72.93	71.16
TraesCS1D01G248900.1	Wheat	cytosol	72.79	71.02
Zm00001d038134_P001	Maize	cytosol	73.62	67.04
Zm00001d010341_P002	Maize	cytosol	70.03	66.1
GSMUA_Achr10P...	Banana	endoplasmic reticulum	34.67	64.36
GSMUA_Achr10P...	Banana	cytosol	16.57	60.0
GSMUA_Achr10P...	Banana	cytosol	14.23	59.54
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	20.03	58.47
GSMUA_Achr2P00090_001	Banana	cytosol	14.78	57.22
GSMUA_Achr2P00100_001	Banana	cytosol	14.36	55.91
CDY13990	Canola	nucleus	95.3	54.55
Bra008860.1-P	Field mustard	plastid	50.69	51.91
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	13.81	49.51
Bra023389.1-P	Field mustard	plastid	44.2	49.16
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	26.38	44.01
Bra030036.1-P	Field mustard	plastid	9.12	36.67
Bra002227.1-P	Field mustard	cytosol	9.39	12.62

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra002228	EnsemblPlants:Bra002228.1	EnsemblPlants:Bra002228.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	UniProt:M4CDE7	PFAM:PF00514
PFAM:PF00651	PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf
SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695	UniParc:UPI000254518A	SEG:seg

Description

AT5G19330 (E=1e-255) | armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein

Coordinates

chrA10:+:10772570..10776730

Molecular Weight (calculated)

79365.4 Da

IEP (calculated)

6.377

GRAVY (calculated)

-0.145

Length

724 amino acids

Sequence
(BLAST)

001: MEQQQPERRE GRSFPERKGQ KRKLEEGAAA AAEDREISAS TTTDGGGDAI LNEIAAQVSV LNSAFSWQES DRAAAKRATQ VLAELAKNED LVNVIVDGGA
101: VPALMTHLQA PPYSEGDLAQ KPFEHEVEKG SAFALGLLAI KPEYQKLIVD KGALPHLVNL LKRSKDGSTS RAVNSVIRRA ADAITNLAHE NSSIKTRVRL
201: EGGIPPLVDL LEFSDSKVQR AAAGALRTLA FKNDDNKNQI VECSALPKLI LMLGSEDAAI HYEAVGVIGN LVHSSPNIKK EVLSAGALQP VIGLLSSCCP
301: ESQREAALLL GQFASTDSDC KVHIVQRGAV RPLIEMLQSP DVQLKEMSAF ALGRLAQDSH NQAGIAHSGG LGPLLKLLDS RNGSLQHNAA FALYGLADNE
401: DNVSDFIRVG GIQKLQDGEF IVQATKDCVS KTLKRLEEKI HGRVLRHLLY LMRISEKSIQ RRVALALAHL CSPEDQRTIF IDENGIFISS CLLTGLDLLL
501: GLPGSTNTKQ QLDGAAALYK LANKSMALSP VDAAPPSPTQ RVYLGEQYVN SATLSDVTFL VEGRRFYAHR ICLLASSDAF RAMFDGGYRE KDARDIEIPN
601: IKWEVFELMM RFIYTGSVDI TIEISQDLLR AADQYLLEGL KRLCEYTIAQ DITLENIGGM YDLSEAFHAM SLRQACILFI LEHFDKLSTM HGQNQLVQRT
701: IPEIREYFCR ALTKSTTNLQ GLRL

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.