Factsheet for Bra006500.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX88895	Canola	cytosol, nucleus, plastid	99.58	99.58
Bra002228.1-P	Field mustard	nucleus	91.75	90.61
AT5G19330.1	Thale cress	cytosol	89.51	90.14
KRH27617	Soybean	cytosol	77.62	78.39
KRH77872	Soybean	cytosol	77.06	78.05
VIT_05s0020g03020.t01	Wine grape	cytosol	77.48	77.7
KRG91259	Soybean	cytosol	76.08	76.94
KRH35552	Soybean	cytosol	75.94	76.8
Os05t0398100-01	Rice	cytosol	22.94	73.21
HORVU1Hr1G062160.1	Barley	cytosol	72.59	72.08
GSMUA_Achr9P17600_001	Banana	cytosol	74.41	71.51
EES19490	Sorghum	nucleus	73.71	70.74
TraesCS1A01G249400.1	Wheat	cytosol	72.17	70.49
TraesCS1B01G260100.1	Wheat	cytosol	72.59	69.95
TraesCS1D01G248900.1	Wheat	cytosol	72.45	69.81
Zm00001d038134_P001	Maize	cytosol	73.01	65.66
Zm00001d010341_P002	Maize	cytosol	69.51	64.8
GSMUA_Achr10P...	Banana	endoplasmic reticulum	34.69	63.59
GSMUA_Achr10P...	Banana	cytosol	16.08	57.5
GSMUA_Achr10P...	Banana	cytosol	13.85	57.23
GSMUA_Achr2P00160_001	Banana	cytosol, extracellular	19.58	56.45
GSMUA_Achr2P00090_001	Banana	cytosol	14.41	55.08
GSMUA_Achr2P00100_001	Banana	cytosol	13.71	52.69
Bra008860.1-P	Field mustard	plastid	51.61	52.19
Bra023389.1-P	Field mustard	plastid	44.62	49.0
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	13.29	47.03
GSMUA_Achr10P...	Banana	extracellular, plasma membrane	26.43	43.55
Bra030036.1-P	Field mustard	plastid	8.81	35.0
Bra002227.1-P	Field mustard	cytosol	9.51	12.62

Protein Annotations

Gene3D:1.25.10.10	Gene3D:3.30.710.10	MapMan:35.1	InterPro:ARM-like	InterPro:ARM-type_fold	InterPro:Armadillo
InterPro:BTB/POZ_dom	EnsemblPlantsGene:Bra006500	EnsemblPlants:Bra006500.1	EnsemblPlants:Bra006500.1-P	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR000210	InterPro:IPR000225	InterPro:IPR011989	UniProt:M4CQL1	PFAM:PF00514
PFAM:PF00651	PFscan:PS50097	PFscan:PS50176	PANTHER:PTHR23315	PANTHER:PTHR23315:SF164	InterPro:SKP1/BTB/POZ_sf
SMART:SM00185	SMART:SM00225	SUPFAM:SSF48371	SUPFAM:SSF54695	UniParc:UPI000253FF48	SEG:seg

Description

AT5G19330 (E=0.0) | armadillo/beta-catenin repeat family protein / BTB/POZ domain-containing protein

Coordinates

chrA03:-:3803890..3807813

Molecular Weight (calculated)

78565.3 Da

IEP (calculated)

6.338

GRAVY (calculated)

-0.140

Length

715 amino acids

Sequence
(BLAST)

001: MEQQRGSRSF PERKGQKRKL EEGPPAEDPQ ISPSTTTDAA PHAALLSEVA AQVSVLNSAF SWKESDRAAA KRAAQVLSEL AKNDDLVSVI VDGGAVPALT
101: THLQPPPYCE GDLAQKPFEH EVEKGSAFAL GLLAIKPEYQ NLIVDKGALP HLVDLLKRSK DSSTSRALNS VIRRAADAIT NLAHENSSIK TRVRLEGGIP
201: PLVELLEYSD SKVQRAAAGA LRTLAFKNDD NKNLIVECNA LPTLILMLGS EDAAIHYEAV GVIGNLVHSS PNIKKEVISS GALQPVIGLL SSCCPESQRE
301: AALLLGQFAS TDSDCKVHIV QRGAVRPLIE MLQSADVQLK EMSAFALGRL AQDSHNQAGI AHSGGLEPLL KLLSSRNGSL QHNAAFALYG LADNEDNVSG
401: FIRVGGVQKL QDEEFIVQAT KDCVSKTLKR LEEKIHGRVL RHLLYQMRIS EKSIQRRVAL ALAHFCSPED QRTVFIDENG ICLLTGLELL LGLLGSTNTK
501: QQLDGAAALY RLANKSMALS PVDAAPPSPT QRVYLGEQYV NSATLSDVTF LVEGRRFYAH RICLLASSDA FRAMFDGGYR EKDARDIEIP NIKWEVFELM
601: MRFIYTGSVD ITIEISQDLL RAADQYLLEG LKRLCEYTIA QDITLENIGS MYDLSEAFHA MSLRQACILF ILEHFEKLSS MHGQNELVQR TIPEIREYFC
701: RALTKSTTNL QSLRL

Best Arabidopsis Sequence Match ( AT5G19330.1 )
(BLAST)

001: MDQQPERREG RSFPERKGQK RKLEEGAAAV EDREISAVST DGGQALLSEV AAQVSVLNSA FSWQESDRAA AKRATQVLAE LAKNEDLVNV IVDGGAVPAL
101: MTHLQAPPYN DGDLAEKPYE HEVEKGSAFA LGLLAIKPEY QKLIVDKGAL PHLVNLLKRN KDGSSSRAVN SVIRRAADAI TNLAHENSSI KTRVRVEGGI
201: PPLVELLEFS DSKVQRAAAG ALRTLAFKND DNKNQIVECN ALPTLILMLG SEDAAIHYEA VGVIGNLVHS SPHIKKEVLT AGALQPVIGL LSSCCPESQR
301: EAALLLGQFA STDSDCKVHI VQRGAVRPLI EMLQSPDVQL KEMSAFALGR LAQDAHNQAG IAHSGGLGPL LKLLDSRNGS LQHNAAFALY GLADNEDNVS
401: DFIRVGGIQK LQDGEFIVQA TKDCVSKTLK RLEEKIHGRV LRHLLYLMRI SEKSIQRRVA LALAHLCSPE DQRTIFIDDN GLELLLGLLG SLNTKQQLDG
501: AAALYKLANK SMALSPVDAA PPSPTQRVYL GEQYVNNATL SDVTFLVEGR TFYAHRICLL ASSDAFRAMF DGGYREKDAR DIEIPNIKWE VFELMMRFIY
601: TGSVDITNEI SKDLLRAADQ YLLEGLKRLC EYTIAQDITL ESIGDMYELS EAFHAMSLRQ ACIMFILEHF DKLSSMPWQN ELVQRTIPEI REYFCRALTK
701: STTNLQSLRL

Arabidopsis Description

ARIAARM REPEAT PROTEIN INTERACTING WITH ABF2 [Source:UniProtKB/Swiss-Prot;Acc:B9DHT4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.