Factsheet for Zm00001d031073_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d008221_P001
Zm00001d010656_P001
Zm00001d012560_P002
Zm00001d017423_P001
Zm00001d019469_P001
Zm00001d020033_P001
Zm00001d020996_P001
Zm00001d022226_P002
Zm00001d043164_P002

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16690.1	Zm00001d022226_P002	AT1G26840.1	16179646
AT5G16690.1	Zm00001d008221_P001	AT2G26760.1	20706207
AT5G16690.1	Zm00001d010656_P001	AT2G26760.1	20706207
AT5G16690.1	Zm00001d012560_P002	AT2G26760.1	20706207
AT5G16690.1	Zm00001d019469_P001	AT2G26760.1	20706207
AT5G16690.1	Zm00001d020033_P001	AT2G26760.1	20706207
AT5G16690.1	Zm00001d020996_P001	AT2G26760.1	20706207
AT5G16690.1	Zm00001d043164_P002	AT2G26760.1	20706207
AT5G16690.1	Zm00001d017423_P001	AT2G37560.1	16179646

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0039g01440.t01	Wine grape	cytosol	34.75	43.44
EES17403	Sorghum	plastid	87.21	37.15
TraesCS7D01G215600.1	Wheat	plastid	69.18	29.31
TraesCS7B01G120800.1	Wheat	plastid	69.18	29.31
HORVU2Hr1G029330.11	Barley	plastid	68.2	28.89
TraesCS7A01G213600.1	Wheat	plastid	67.54	28.65
PGSC0003DMT400039753	Potato	cytosol	33.77	28.53
Os10t0402200-01	Rice	nucleus, plastid	65.9	27.99
GSMUA_Achr2P17940_001	Banana	nucleus	38.03	18.27
Bra008604.1-P	Field mustard	nucleus	40.33	18.22
CDX69432	Canola	nucleus	40.33	16.85
AT5G16690.1	Thale cress	nucleus	39.34	16.35
CDY49642	Canola	nucleus	39.34	15.33
KRH23980	Soybean	plastid	36.72	15.22
Solyc12g013880.1.1	Tomato	nucleus	30.16	13.9
VIT_16s0039g01430.t01	Wine grape	nucleus	1.31	1.08
PGSC0003DMT400039751	Potato	nucleus	0.66	0.61

Protein Annotations

MapMan:13.2.1.1.3	UniProt:A0A1D6KGB9	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005664	GO:GO:0006139
GO:GO:0006259	GO:GO:0006260	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009744	GO:GO:0009791	GO:GO:0009987	GO:GO:0048527	ProteinID:ONM02127.1	InterPro:ORC3
PFAM:PF07034	PANTHER:PTHR12748	UniParc:UPI0008439534	EnsemblPlantsGene:Zm00001d031073	EnsemblPlants:Zm00001d031073_P001	EnsemblPlants:Zm00001d031073_T001
SEG:seg	:	:	:	:	:

Description

origin recognition complex3Origin recognition complex subunit 3

Coordinates

chr1:-:175980669..175983357

Molecular Weight (calculated)

33780.7 Da

IEP (calculated)

6.591

GRAVY (calculated)

-0.070

Length

305 amino acids

Sequence
(BLAST)

001: MSPPPCDALP TAANNIQPFL VLHKAAASSV PSSRSQRQIQ TSQPSSPNRK SANRCRQPAG EECEDEGDSE LYEQLRAEAF HRTWSKIQST IDEVLRAINL
101: KLFDQVLQWA KESFASAHAI TKKHHTEVQQ PYPLLTDVIC RRIPTVFVLT KNAEFVDDIT TFHDLAGHMK SNGCHIVKLS AAELSAKHGV GGCFRSLLGQ
201: LLSDVPDVAD VSALASWYCE AENFDQPIIV IIDDLEQCSG DVLGEFVMML SEWVFKIPVF FVMGIATTLD APKKLLSLTI IPPCGKLGSR GRKVWLLVSV
301: LRREL

Best Arabidopsis Sequence Match ( AT5G16690.1 )
(BLAST)

001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS

Arabidopsis Description

ORC3ORC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.