Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008604.1-P | Field mustard | nucleus | 90.82 | 98.22 |
| CDY49642 | Canola | nucleus | 97.12 | 90.55 |
| AT5G16690.1 | Thale cress | nucleus | 85.48 | 85.01 |
| VIT_16s0039g01440.t01 | Wine grape | cytosol | 18.36 | 54.92 |
| VIT_16s0039g01430.t01 | Wine grape | nucleus | 25.07 | 49.33 |
| KRH23980 | Soybean | plastid | 47.95 | 47.55 |
| Solyc12g013880.1.1 | Tomato | nucleus | 42.6 | 46.98 |
| PGSC0003DMT400039753 | Potato | cytosol | 22.6 | 45.71 |
| PGSC0003DMT400039751 | Potato | nucleus | 20.41 | 45.29 |
| GSMUA_Achr2P17940_001 | Banana | nucleus | 39.04 | 44.88 |
| TraesCS7B01G120800.1 | Wheat | plastid | 43.42 | 44.03 |
| TraesCS7A01G213600.1 | Wheat | plastid | 43.15 | 43.81 |
| HORVU2Hr1G029330.11 | Barley | plastid | 42.88 | 43.47 |
| TraesCS7D01G215600.1 | Wheat | plastid | 42.6 | 43.19 |
| EES17403 | Sorghum | plastid | 42.19 | 43.02 |
| Os10t0402200-01 | Rice | nucleus, plastid | 42.05 | 42.76 |
| Zm00001d031073_P001 | Maize | plastid | 16.85 | 40.33 |
Protein Annotations
| MapMan:13.2.1.1.3 | GO:A0A078BYK7 | EnsemblPlants:CDX69432 | ProteinID:CDX69432 | ProteinID:CDX69432.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005664 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006260 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | EnsemblPlantsGene:GSBRNA2T00135401001 | InterPro:ORC3 |
| PFAM:PF07034 | PANTHER:PTHR12748 | UniParc:UPI0004EE71FD | SEG:seg | : | : |
Description
BnaA10g17810D
Coordinates
chrLK031790:-:191782..197068
Molecular Weight (calculated)
81610.5 Da
IEP (calculated)
8.404
GRAVY (calculated)
-0.177
Length
730 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSTTVADP PPSSTTDSFN SNAAAAENDI RPFFVLHKAS SGSKSTATVK AKRRIESPSP KLAKKSEIES VEEEDGQFFS TLRLRVFETV WSKIENTIQD
101: VLRDSNSKVF SGVHDWICES FESVRSSGAL SLSEAVRSYP VLSQPSSKQL FTALVLTRNL EMVDDLSTFE DLGLHLKAQG CHVAKLSSMD FSAKNGVGGC
201: LRGLLRQFVM PTIDVADVTI LASWYRENGN QKNPVVIIVD DTERCSGSVL SELILILSEW AVKVPVFLIM GVSTAHDAPR KILSANALQR LCATRFTLSS
301: PAERMDEVLE AVFLKPCSGF TVSHKVALCM RSYFLCQDGT LTSFVKTLKI ACLQHFSLEP LSILLEHFCQ DNQLPGEGTG LLTEATMKHA FELPSVTRNK
401: ITRSTCEMLP QFLLDLQRMP NPWSIVVLCI YEAGKFDKLR LLDIFCETLD PEARYLKYFS PSAILNSQSH VSGRNSVIRR VLRKLRDLSP AQLSSLLKSW
501: ESLTAEFSEI NEKVMELHPF MRNVEAAGQR PGLPSSPKKH ASRSHSKLEK ELKAMTDKIS AVIEFMLREY MKPVETVPFN EILCFKNVDK LQSALLGDPR
601: GRIQSDLLES HSILNCICCS QRGTTLLPSM HDTSILYTLA QEHADVINLH DWYQSFKTIL IPRNSKAKSK SKTTSKSKKR KERCEEPEPP AEASIQARFC
701: RAVMELQIAG LIRMPSKRRP DFVQRVAFSS
101: VLRDSNSKVF SGVHDWICES FESVRSSGAL SLSEAVRSYP VLSQPSSKQL FTALVLTRNL EMVDDLSTFE DLGLHLKAQG CHVAKLSSMD FSAKNGVGGC
201: LRGLLRQFVM PTIDVADVTI LASWYRENGN QKNPVVIIVD DTERCSGSVL SELILILSEW AVKVPVFLIM GVSTAHDAPR KILSANALQR LCATRFTLSS
301: PAERMDEVLE AVFLKPCSGF TVSHKVALCM RSYFLCQDGT LTSFVKTLKI ACLQHFSLEP LSILLEHFCQ DNQLPGEGTG LLTEATMKHA FELPSVTRNK
401: ITRSTCEMLP QFLLDLQRMP NPWSIVVLCI YEAGKFDKLR LLDIFCETLD PEARYLKYFS PSAILNSQSH VSGRNSVIRR VLRKLRDLSP AQLSSLLKSW
501: ESLTAEFSEI NEKVMELHPF MRNVEAAGQR PGLPSSPKKH ASRSHSKLEK ELKAMTDKIS AVIEFMLREY MKPVETVPFN EILCFKNVDK LQSALLGDPR
601: GRIQSDLLES HSILNCICCS QRGTTLLPSM HDTSILYTLA QEHADVINLH DWYQSFKTIL IPRNSKAKSK SKTTSKSKKR KERCEEPEPP AEASIQARFC
701: RAVMELQIAG LIRMPSKRRP DFVQRVAFSS
001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
Arabidopsis Description
ORC3ORC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.