Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G120800.1 | Wheat | plastid | 97.78 | 97.78 |
| TraesCS7A01G213600.1 | Wheat | plastid | 97.22 | 97.36 |
| HORVU2Hr1G029330.11 | Barley | plastid | 95.14 | 95.14 |
| Os10t0402200-01 | Rice | nucleus, plastid | 77.64 | 77.86 |
| EES17403 | Sorghum | plastid | 73.47 | 73.88 |
| Zm00001d031073_P001 | Maize | plastid | 29.31 | 69.18 |
| GSMUA_Achr2P17940_001 | Banana | nucleus | 47.92 | 54.33 |
| VIT_16s0039g01430.t01 | Wine grape | nucleus | 24.03 | 46.63 |
| VIT_16s0039g01440.t01 | Wine grape | cytosol | 15.42 | 45.49 |
| Bra008604.1-P | Field mustard | nucleus | 41.11 | 43.85 |
| KRH23980 | Soybean | plastid | 44.72 | 43.75 |
| Solyc12g013880.1.1 | Tomato | nucleus | 40.0 | 43.5 |
| PGSC0003DMT400039753 | Potato | cytosol | 21.53 | 42.94 |
| PGSC0003DMT400039751 | Potato | nucleus | 19.58 | 42.86 |
| CDX69432 | Canola | nucleus | 43.19 | 42.6 |
| AT5G16690.1 | Thale cress | nucleus | 42.78 | 41.96 |
| CDY49642 | Canola | nucleus | 43.06 | 39.59 |
| TraesCS7D01G215500.1 | Wheat | cytosol, nucleus, plastid | 6.11 | 14.24 |
Protein Annotations
| MapMan:13.2.1.1.3 | Gene3D:3.40.50.300 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005664 | GO:GO:0006139 |
| GO:GO:0006259 | GO:GO:0006260 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009744 | GO:GO:0009791 | GO:GO:0009987 | GO:GO:0048527 | InterPro:ORC3 | PFAM:PF07034 |
| PANTHER:PTHR12748 | EnsemblPlantsGene:TraesCS7D01G215600 | EnsemblPlants:TraesCS7D01G215600.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:+:175646622..175653409
Molecular Weight (calculated)
79262.7 Da
IEP (calculated)
7.337
GRAVY (calculated)
-0.115
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTPSREAPL TAANNIQPFF VLHKASAGAA ASVSSPATSR ARRRIEVSQP SSPNPKSAKR PRDDDDEGDM ELYEQLRLEA FHCTWSKIQS TINEVLRGIN
101: LKLFDQVLRW VQESFSAIRS ITRPCPAEIQ QPCPLLTDVI CRKIPTAFVL TKNAEFVDDV TTFRDLMDHL ESNGCHLAKL SATELSSKNG VGGCLRSLLR
201: QLLSDVPDVA DVSALASWYC KGDNYDQPII IIIDDLEQCS GDVLGELVMT LSEWVIKIPI FFVMGIATTL DAPRKLLSSE ALQRLDPCKL TLGSPSDRMN
301: ALVEAILVKP CAGFCISHEV AVFLRNYFFR HDGTITSFIS ALKLACSKHF SVEPLSFLCM GMLEEDSENF WRDKFGALPV AIQKQAFGLP SCTRENNSIK
401: PGNNLVEGLS ELMKLQKDWS XXXXCLYEAG RHGKVQLLDI FCEAINLDLH TQNDSNNELL MSKLTSGNLS SGKSGAGRRC IAQALDTVRY MPMETLFRVL
501: EVWSIHLEGM NEINAKVKEL QSTTTSEDCV TITKDKWPRR STNSTAIGTV PLNDKATMLL DDITRNFLVP VECLPFHEII CFKNVGVLQS ALIGNPRRMV
601: QLDLLKSQSS LNCSCCSRNG IAVSASLHDT SVMCNLAQEY GDVINLHDWY LSFDGIINSK GKSKLVGSPS KKKSKATPQQ SGAMIQARFC RAVTELQITG
701: LLRMPSKRRP DLVQRIAFGP
101: LKLFDQVLRW VQESFSAIRS ITRPCPAEIQ QPCPLLTDVI CRKIPTAFVL TKNAEFVDDV TTFRDLMDHL ESNGCHLAKL SATELSSKNG VGGCLRSLLR
201: QLLSDVPDVA DVSALASWYC KGDNYDQPII IIIDDLEQCS GDVLGELVMT LSEWVIKIPI FFVMGIATTL DAPRKLLSSE ALQRLDPCKL TLGSPSDRMN
301: ALVEAILVKP CAGFCISHEV AVFLRNYFFR HDGTITSFIS ALKLACSKHF SVEPLSFLCM GMLEEDSENF WRDKFGALPV AIQKQAFGLP SCTRENNSIK
401: PGNNLVEGLS ELMKLQKDWS XXXXCLYEAG RHGKVQLLDI FCEAINLDLH TQNDSNNELL MSKLTSGNLS SGKSGAGRRC IAQALDTVRY MPMETLFRVL
501: EVWSIHLEGM NEINAKVKEL QSTTTSEDCV TITKDKWPRR STNSTAIGTV PLNDKATMLL DDITRNFLVP VECLPFHEII CFKNVGVLQS ALIGNPRRMV
601: QLDLLKSQSS LNCSCCSRNG IAVSASLHDT SVMCNLAQEY GDVINLHDWY LSFDGIINSK GKSKLVGSPS KKKSKATPQQ SGAMIQARFC RAVTELQITG
701: LLRMPSKRRP DLVQRIAFGP
001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
Arabidopsis Description
ORC3ORC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.