Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G213600.1 | Wheat | plastid | 54.96 | 48.54 |
| TraesCS7B01G120800.1 | Wheat | plastid | 54.96 | 48.47 |
| HORVU2Hr1G029330.11 | Barley | plastid | 54.96 | 48.47 |
| TraesCS7D01G215600.1 | Wheat | plastid | 54.33 | 47.92 |
| Os10t0402200-01 | Rice | nucleus, plastid | 53.7 | 47.49 |
| EES17403 | Sorghum | plastid | 53.54 | 47.49 |
| VIT_16s0039g01430.t01 | Wine grape | nucleus | 27.72 | 47.44 |
| Solyc12g013880.1.1 | Tomato | nucleus | 47.24 | 45.32 |
| PGSC0003DMT400039751 | Potato | nucleus | 21.89 | 42.25 |
| KRH23980 | Soybean | plastid | 47.56 | 41.03 |
| Bra008604.1-P | Field mustard | nucleus | 42.2 | 39.7 |
| AT5G16690.1 | Thale cress | nucleus | 45.51 | 39.37 |
| PGSC0003DMT400039753 | Potato | cytosol | 22.36 | 39.34 |
| CDX69432 | Canola | nucleus | 44.88 | 39.04 |
| Zm00001d031073_P001 | Maize | plastid | 18.27 | 38.03 |
| CDY49642 | Canola | nucleus | 45.2 | 36.65 |
| VIT_16s0039g01440.t01 | Wine grape | cytosol | 14.02 | 36.48 |
Protein Annotations
| MapMan:13.2.1.1.3 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005664 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006260 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009744 |
| GO:GO:0009791 | GO:GO:0009987 | GO:GO:0048527 | EnsemblPlantsGene:GSMUA_Achr2G17940_001 | EnsemblPlants:GSMUA_Achr2P17940_001 | EnsemblPlants:GSMUA_Achr2T17940_001 |
| UniProt:M0S8Y5 | InterPro:ORC3 | PFAM:PF07034 | PANTHER:PTHR12748 | UniParc:UPI000294C789 | SEG:seg |
Description
ORC3 - Putative origin recognition complex subunit 3, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr2G17940_001]
Coordinates
chr2:-:18394295..18405089
Molecular Weight (calculated)
71298.8 Da
IEP (calculated)
7.158
GRAVY (calculated)
-0.019
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MTWSKIDTTI KEVLTRVHRN LFAEVHQWAL ESFLALKSGK PRNAFEIQTP YPLLDDVICK QIPTAMILTK NAEFVDDMLT FQELGEHLKS KGCHIANLSA
101: MDFCAKDGIA GCLRSLLRQL VMDAPDMADM SVLSSWYCEP ENYDHPVIIV IDDMERCSGA ILADFIRLLS EWVIKLPVIF IMGVATTDTA KKLLPSDALQ
201: HLQSSKFTLG SPLERMNALV EAVLVKPSFG FNIGHNVAVF MRNYFLGHDG TITSFVRALK LACVKHFSME PLSFLGIDIL DENQVFLHGK CDALPDSLLK
301: YAFNLPSCKR CKHVTDFRDD LGEGLSDLRK LLKAWSSVIL CLYEVGKHNK IQLLDIFCEA TDPTLSSLDP SNHKLERSFN GQNLAEGRLD FKGGLIGQLI
401: HTVRYVLELP LSSLIKLLDS WSIHTEELCE VHGEVRELQS VVKSSNGGNN LKDRQIDCHR TSLSVNGKAA ALLDNMVRKF LMPIECLCFH EIICFRNVDI
501: LQSALIGNPR RNIQVDLMKS TTYIKCSCCS GNENVLSPTM HDTSVMYNLA QEHGDLVNLQ DWYHSFKSTV LGTNKLKCPL QHSPMSKKVK SSPSESEASI
601: QARFCRAVIE LQIAGLFRMP SKKRPDFVQR VAFGL
101: MDFCAKDGIA GCLRSLLRQL VMDAPDMADM SVLSSWYCEP ENYDHPVIIV IDDMERCSGA ILADFIRLLS EWVIKLPVIF IMGVATTDTA KKLLPSDALQ
201: HLQSSKFTLG SPLERMNALV EAVLVKPSFG FNIGHNVAVF MRNYFLGHDG TITSFVRALK LACVKHFSME PLSFLGIDIL DENQVFLHGK CDALPDSLLK
301: YAFNLPSCKR CKHVTDFRDD LGEGLSDLRK LLKAWSSVIL CLYEVGKHNK IQLLDIFCEA TDPTLSSLDP SNHKLERSFN GQNLAEGRLD FKGGLIGQLI
401: HTVRYVLELP LSSLIKLLDS WSIHTEELCE VHGEVRELQS VVKSSNGGNN LKDRQIDCHR TSLSVNGKAA ALLDNMVRKF LMPIECLCFH EIICFRNVDI
501: LQSALIGNPR RNIQVDLMKS TTYIKCSCCS GNENVLSPTM HDTSVMYNLA QEHGDLVNLQ DWYHSFKSTV LGTNKLKCPL QHSPMSKKVK SSPSESEASI
601: QARFCRAVIE LQIAGLFRMP SKKRPDFVQR VAFGL
001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS
Arabidopsis Description
ORC3ORC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.