Factsheet for HORVU2Hr1G029330.11

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 6
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G001680.1
HORVU0Hr1G001690.16
HORVU0Hr1G026010.1
HORVU1Hr1G068010.7
HORVU1Hr1G068080.1
HORVU1Hr1G068160.2
HORVU2Hr1G028500.1
HORVU3Hr1G040990.2
HORVU3Hr1G078880.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G16690.1	HORVU2Hr1G028500.1	AT1G26840.1	16179646
AT5G16690.1	HORVU0Hr1G001680.1	AT2G26760.1	20706207
AT5G16690.1	HORVU0Hr1G001690.16	AT2G26760.1	20706207
AT5G16690.1	HORVU0Hr1G026010.1	AT2G26760.1	20706207
AT5G16690.1	HORVU1Hr1G068010.7	AT2G26760.1	20706207
AT5G16690.1	HORVU1Hr1G068080.1	AT2G26760.1	20706207
AT5G16690.1	HORVU1Hr1G068160.2	AT2G26760.1	20706207
AT5G16690.1	HORVU3Hr1G040990.2	AT2G26760.1	20706207
AT5G16690.1	HORVU3Hr1G078880.2	AT2G26760.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G120800.1	Wheat	plastid	95.56	95.56
TraesCS7D01G215600.1	Wheat	plastid	95.14	95.14
TraesCS7A01G213600.1	Wheat	plastid	95.0	95.13
Os10t0402200-01	Rice	nucleus, plastid	77.78	77.99
EES17403	Sorghum	plastid	73.61	74.02
Zm00001d031073_P001	Maize	plastid	28.89	68.2
GSMUA_Achr2P17940_001	Banana	nucleus	48.47	54.96
VIT_16s0039g01440.t01	Wine grape	cytosol	15.83	46.72
VIT_16s0039g01430.t01	Wine grape	nucleus	23.89	46.36
Bra008604.1-P	Field mustard	nucleus	41.39	44.15
Solyc12g013880.1.1	Tomato	nucleus	40.28	43.81
PGSC0003DMT400039753	Potato	cytosol	21.67	43.21
PGSC0003DMT400039751	Potato	nucleus	19.72	43.16
CDX69432	Canola	nucleus	43.47	42.88
KRH23980	Soybean	plastid	43.61	42.66
AT5G16690.1	Thale cress	nucleus	43.06	42.23
CDY49642	Canola	nucleus	43.33	39.85

Protein Annotations

MapMan:13.2.1.1.3	Gene3D:3.40.50.300	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005664	GO:GO:0006139
GO:GO:0006259	GO:GO:0006260	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009744	GO:GO:0009791	GO:GO:0009987	GO:GO:0048527	EnsemblPlantsGene:HORVU2Hr1G029330	EnsemblPlants:HORVU2Hr1G029330.11
UniProt:M0XX58	InterPro:ORC3	PFAM:PF07034	PANTHER:PTHR12748	UniParc:UPI000295B262	SEG:seg

Description

No Description!

Coordinates

chrchr2H:+:104553934..104562369

Molecular Weight (calculated)

79937.7 Da

IEP (calculated)

7.511

GRAVY (calculated)

-0.093

Length

720 amino acids

Sequence
(BLAST)

001: MATPSREASL TAANNIQPFF VLHKASAGAS ASVSSPATSR ARRRIEVSQP LSPNPKSAKR PRDDEEEVDI ELYEHLRLEA FNCTWSKIQS TINEVLRGIN
101: LKLFDQVLRW VQESFSTIRS IMRPCPAEIQ QPYPLLTDVI CRKIPTTFVL TKNAEFVDDV TTFRDLMDHL ESNGCHLAKL SATELSAKNG VGGCLRSLLR
201: QLLSDVPDVA DVSALASWYC KGDNYDQPII IIIDDLEQCS GDVLGELVMT LSEWVIKIPI FFVMGIATTL DAPRKLLSSE ALQRLDPCKL TLGSPSDRMN
301: ALVEAILVKP CAGFCISHEV AVFLRNYFFR HDGTITSFIS ALKLACSKHF SVEPLSFLCM GMLEEDSENF WHDKFGALPV GIQKQAFGLP SCTREYNSIK
401: PGNNLVEGLS ELMKLQKDWS SVLSCLYEAG RHGKVQLLDI FCEAINPDLH TRNDSNNELL MSKLTSGNLS SGKSGAGRRC IAQALDTVRY MPMETLFHVL
501: EVWSIHLEGM NEIIAKVKEL QSTTTSADCV ITTKDKWPRR STNSTAIGTV PLNDKATMLL DDITRKLLVP VECLPFHEII CFKNVGVLQS ALIGNPRKMV
601: QLDLLKSQSR LNCSCCSRNG IAVSASLHDT SVMCNLAQEY GDVINLHDWY LSFDGIINSK GKNKLVGSPS KKKSKATPQQ SEAMIQARFC RAVTELQITG
701: LLRMPSKRRP DLVQRIAFGP

Best Arabidopsis Sequence Match ( AT5G16690.1 )
(BLAST)

001: MAPSGTVADP PQCSTTDSFN SSDTAENDIR PFFVLHKASS GNHNGKLTGI VKSKRRIESP SPKIAKRSEV ESVEEEDGQF FSTLRFKVFE TVWSKIEKTI
101: EDVLRNSNSK VFSGIHDWIR ESFESIISSG ALKLSEAVRS YPVLTQASSK QLLTAMVLTR NLEMVDDLLT FEELELHLKS QGCHVAKLSS MDFSAKSGVG
201: GCLRGLLRQF VMPTVDVADV TILASWYREN KNHENPVVII VDDTERCCGP VLSDLILILS EWAIKVPIFL IMGVSTAHDA PRKILSVNAL QRLCATRFTL
301: SSPAERMDAV LKAVFLKPCS GFTVSHKVAL FMRSYFLCQD GTLTSFVRTL KIACLQHFSL EPLSIMLEHF CHDGVNQLSG EGTELLTEAT MKHAFDLPSV
401: TRNKITRSTF EMLPHFLLDL QRMPNPWSIV VLCLYEAGKF DKLRLLDIFC EILDPEARYL KYFSPSEIVN SQSHNSGRNN VIRRVLRKLR DLSPSQLSSM
501: LKSWENLTAE FTEINDKVIE LHPFMRAVEA AGQRQGLPNS PKKHASRSNS KLEKELKAMT DKVATVIEFM LREYMKPVES VPFHEILCFK NVDKLQSALL
601: GDPRGRIQLD LLESHDILHC VCCSQRGTTL LPSMHDTSIL YKLAQEHADV INLHDWYQSF KTILIPRSSK AKQKSKSSSK SKKRKEICEE PEAPAEALIQ
701: ARFCRAVMEL QITGLIRMPS KRRPDFVQRV AFGS

Arabidopsis Description

ORC3ORC3 [Source:UniProtKB/TrEMBL;Acc:A0A178UNG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.